* initial commit Signed-off-by: raver119@gmail.com <raver119@gmail.com> * another initial commit Signed-off-by: raver119@gmail.com <raver119@gmail.com> * another initial commit Signed-off-by: raver119@gmail.com <raver119@gmail.com> * one more initial commit Signed-off-by: raver119@gmail.com <raver119@gmail.com> * next step Signed-off-by: raver119@gmail.com <raver119@gmail.com> * next step Signed-off-by: raver119@gmail.com <raver119@gmail.com> * next step Signed-off-by: raver119@gmail.com <raver119@gmail.com> * next step Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Refactored buffer() and shapeInfo() methods usage with NDArray class. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt Graph class methods to use const shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt choose op to use constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt where op shape method to use constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt lstsq op to use constant empty shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt matrix_diag_part op shape routine to use constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt determinant ops to use constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt mean_pairwssqerr_loss ops to use constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt ops shape methods. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt shape methods for loss ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt log_loss op shape method. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt shape methods for ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt dilation2d ops shape methods. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted deconv2d ops shape methods. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted dynamicRNN op shape method. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted shape methods for ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted shape methods for lstm layer ops. Signed-off-by: shugeo <sgazeos@gmail.com> * few updates Signed-off-by: raver119@gmail.com <raver119@gmail.com> * first cuda tweak Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Adopt constant shapes for sconv2d ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt constant shapes for gru ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt constant shapes with shape methods for segment ops and so on. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted constant shapes with unsorted_segment_* ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted constant shapes with gamma op shape method. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted shape methods of reduce_stddev ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted shape methods for reduce_* ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt shape method for squeeze op. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt strided_slice shape method. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored concat op shape method to adopt constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted shape method for mirror_pad op. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted split op shape method. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted tile ops shape methods. Signed-off-by: shugeo <sgazeos@gmail.com> * Added const cast for mkldnn routines handles. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored logSoftMaxForVector_ routine to conform with proper data and shape pointer casts. Signed-off-by: shugeo <sgazeos@gmail.com> * Cosmetic changes to proper usage of constant pointers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored a couple shape comparators for strides and addBias helpers to proper use data pointers with inplace option. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored depthToSpace helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored histogram helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored im2col helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored gather and gatherND helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage on percentile helper. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed gather shape with helpers and range buffer usage. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage with space to depth helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage and constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage with LUP decomposition> Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored onehot_ helper. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored pad and prefix to use constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactoed softmax helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed space to batch helpers to use buffers properly. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed stack and split helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage with sparse to dense helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage with mindistance_ helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage with tile helper. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed constant shape usage. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed constant shape usage with legacy pairwise bool ops. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored a couple of methods to adopt constant shape usage. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed broadcasting with constant shape." Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed const usage with inplace reverse and constant shapes with legacy reduction. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored legacy ops with const shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored sort to adopt constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Corrected sort for constant shape usage. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed constant shape usage with special methods. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored Context to conform with constant shape usage. Signed-off-by: shugeo <sgazeos@gmail.com> * CUDA broadcasting headers Signed-off-by: raver119@gmail.com <raver119@gmail.com> * pairwise/indexreduce/random headers Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Refactored native ops to adopt constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * legacy reduce3/scalar headers Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Corrected pullRow signature and tests. Signed-off-by: shugeo <sgazeos@gmail.com> * Corrected routines to proper use of constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored tests to use constant shapes properly. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored legacy ops tests to use constant shapes properly. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored buffer usage with NDArray tests. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed native ops tests. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed special concat routine. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage with test. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed buffer usage with a test. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored TAD.h and tests. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored calcStrides* routines to use constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed miscelaneous errors with constant shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * NativeOps const changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Corrected definitions for declared functions. Signed-off-by: shugeo <sgazeos@gmail.com> * NativeOps const changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * few more const changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Fixed const shapes with shape routines. Signed-off-by: shugeo <sgazeos@gmail.com> * few more const changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Fixed shape method for broadcastable case. Signed-off-by: shugeo <sgazeos@gmail.com> * few more const changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * xw_plus_b BP shape fn restored Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Fixed signatures with broadcasting. Signed-off-by: shugeo <sgazeos@gmail.com> * Repaired backprops shape methods for a set of operations. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored broadcast bool for cuda. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored methods for 3 args with const qualifier. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed a couple of kernel signatures for broadcasting. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed kernels signatures for const buffers and shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored pairwise methods to persistent buffers and shapes usage. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt const to buffers and shapes with kernels. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopt const to buffers and shapes with scalar kernels. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored indexreduce kernels signatures to use const buffers and shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored pairwise kernels to adopt cons shapes and buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored pairwise bool kernels to adopt cons shapes and buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored random special ops to conform with const shapes and buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored native ops to conform with const shapes and buffers under cuda platform. Signed-off-by: shugeo <sgazeos@gmail.com> * Cosmetical changes only. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed const shapes and buffers error. Signed-off-by: shugeo <sgazeos@gmail.com> * Corrected start pos routine. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored methods to conform with const shapes and buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored helpers to use proper methods instead. Signed-off-by: shugeo <sgazeos@gmail.com> * bunch of changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * next bunch of changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * next bunch of changes Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Fixed execScalar declaration. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed execScalar declaration. Signed-off-by: shugeo <sgazeos@gmail.com> * Corrected const shape cases with sort and so on. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed const shapes for sort. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored kernel declarations to adopt const shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed kernels declarations to adopt const shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Corrected kernel declarations to adopt const shapes and buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed kernels declarations to adopt const shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed segment helpers kernels declarations and so on to adopt const shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed const shape usage with segment and solve helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed kernel declaration with adjustWeight helper. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed cuda implementations for constant shape helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted const shape usage with kernels. Signed-off-by: shugeo <sgazeos@gmail.com> * Adopted top_k kernels to use const shapes and buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Corrected kernels declarations to adopt const shapes with helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored NDArray definitions to adopt const shapes and buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed const shapes with image suppression helpers. Signed-off-by: shugeo <sgazeos@gmail.com> * Slight improvement with buffers. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored buffer usage. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored buffer usage with tests. Signed-off-by: shugeo <sgazeos@gmail.com> * Fixed const shape usage with definitions. Signed-off-by: shugeo <sgazeos@gmail.com> * minor updates on cpu side Signed-off-by: raver119@gmail.com <raver119@gmail.com> * Refactored const shape usage with ConstantDescritor and native ops with cuda platform. Signed-off-by: shugeo <sgazeos@gmail.com> * Refactored tear and tile kernels to adopt with const shapes. Signed-off-by: shugeo <sgazeos@gmail.com> * softmax_loop fix Signed-off-by: raver119 <raver119@gmail.com> * update missing signature Signed-off-by: raver119@gmail.com <raver119@gmail.com> * softmax again Signed-off-by: raver119@gmail.com <raver119@gmail.com> * few more missing consts Signed-off-by: raver119 <raver119@gmail.com> * new methods updated Signed-off-by: raver119@gmail.com <raver119@gmail.com> Co-authored-by: shugeo <sgazeos@gmail.com>
180 lines
7.6 KiB
Plaintext
180 lines
7.6 KiB
Plaintext
/*******************************************************************************
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* Copyright (c) 2015-2018 Skymind, Inc.
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*
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* This program and the accompanying materials are made available under the
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* terms of the Apache License, Version 2.0 which is available at
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* https://www.apache.org/licenses/LICENSE-2.0.
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
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* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
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* License for the specific language governing permissions and limitations
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* under the License.
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*
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* SPDX-License-Identifier: Apache-2.0
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******************************************************************************/
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//
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// @author George A. Shulinok <sgazeos@gmail.com>
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//
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#include <ops/declarable/helpers/qr.h>
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#include <array/NDArrayFactory.h>
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#include <helpers/MmulHelper.h>
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namespace sd {
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namespace ops {
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namespace helpers {
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template <typename T>
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static __global__ void matrixMinorKernel(T* outBuffer, Nd4jLong* outShape, T* inBuffer, Nd4jLong* inShape, Nd4jLong column, Nd4jLong rows, Nd4jLong columns) {
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// auto tid = threadIdx.x + blockDim.x * blockIdx.x;
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// auto step = blockDim.x * gridDim.x;
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// if (threadIdx.x == 0) {
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// for (auto i = tid; i < column; i += step) {
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// Nd4jLong diagPos[] = {i, i};
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// auto zIndex = shape::getOffset(outShape, diagPos);
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// outBuffer[zIndex] = T(1.f);
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// }
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// }
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// __syncthreads();
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for (auto i = blockIdx.x; i < rows; i += gridDim.x)
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for (auto j = threadIdx.x; j < columns; j += blockDim.x) {
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Nd4jLong pos[] = {i,j};
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auto zIndex = shape::getOffset(outShape, pos);
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auto xIndex = shape::getOffset(inShape, pos);
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if (i < column || j < column) {
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outBuffer[zIndex] = i != j?T(0.f):T(1.f);
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}
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else
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outBuffer[zIndex] = inBuffer[xIndex]; //m.t<T>(i,j) = in.t<T>(i,j);
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}
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}
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template <typename T>
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NDArray matrixMinor(LaunchContext* context, NDArray& in, Nd4jLong col) {
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NDArray m = in.ulike();
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m.setIdentity();
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m({col, m.rows(), col, m.columns()}).assign(in({col, m.rows(), col, m.columns()}));
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// auto stream = context->getCudaStream();
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// matrixMinorKernel<T><<<128, 128, 256, *stream>>>(m.dataBuffer()->specialAsT<T>(), m.specialShapeInfo(),
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// matrixMinorKernel<T><<<128, 128, 256, *stream>>>(m.dataBuffer()->specialAsT<T>(), m.specialShapeInfo(),
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// reinterpret_cast<T*>(in.specialBuffer()), in.specialShapeInfo(), col, in.rows(), in.columns());
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//
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m.tickWriteDevice();
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return m;
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}
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/* m = I - v v^T */
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template <typename T>
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static __global__ void vmulKernel(T* resBuf, const Nd4jLong* resShape, T const* vBuff, Nd4jLong const* vShape, Nd4jLong n) {
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for (auto i = blockIdx.x; i < n; i += gridDim.x)
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for (auto j = threadIdx.x; j < n; j += blockDim.x) {
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Nd4jLong posR[] = {i, j};
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auto indexR = shape::getOffset(resShape, posR);
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auto indexX = shape::getIndexOffset(i, vShape);
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auto indexY = shape::getIndexOffset(j, vShape);
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resBuf[indexR] = T(-2.f) * vBuff[indexX] * vBuff[indexY] + (i != j?T(0.f):T(1.f));
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}
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}
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template <typename T>
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NDArray vmul(LaunchContext* context, NDArray const& v, int n)
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{
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NDArray res('c', {n,n}, v.dataType(), context); // x = matrix_new(n, n);
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auto stream = context->getCudaStream();
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vmulKernel<T><<<128, 128, 128, *stream>>>(res.dataBuffer()->specialAsT<T>(), res.specialShapeInfo(),
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reinterpret_cast<T const*>(v.specialBuffer()), v.specialShapeInfo(), n);
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return res;
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}
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template <typename T>
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static bool diagonalIsPositive(NDArray* matrix, Nd4jLong k) {
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T hVal;
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Nd4jLong pos[] = {k, k};
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auto shift = shape::getOffset(matrix->shapeInfo(), pos);
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cudaMemcpy(&hVal, matrix->specialBuffer(), sizeof(T), cudaMemcpyDeviceToHost);
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return hVal > T(0.f);
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}
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template <typename T>
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void qrSingle(LaunchContext* context, NDArray* matrix, NDArray* Q, NDArray* R, bool const fullMatricies) {
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Nd4jLong M = matrix->sizeAt(0);
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Nd4jLong N = matrix->sizeAt(1);
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auto resQ = fullMatricies?Q->ulike():NDArrayFactory::create<T>(matrix->ordering(), {M,M}, Q->getContext());
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auto resR = fullMatricies?R->ulike():matrix->ulike();
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std::vector<NDArray> q(M);
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NDArray z = *matrix;
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NDArray e('c', {M}, DataTypeUtils::fromT<T>(), context); // two internal buffers and scalar for squared norm
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for (auto k = 0; k < N && k < M - 1; k++) { // loop for columns, but not further then row number
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e.nullify();
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z = matrixMinor<T>(context, z, k); // minor computing for current column with given matrix z (initally is a input matrix)
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auto currentColumn = z({0, 0, k, k + 1}); // retrieve k column from z to x buffer
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auto norm = currentColumn.reduceAlongDimension(reduce::Norm2, {0});
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if (diagonalIsPositive<T>(matrix, k)) //matrix->t<T>(k,k) > T(0.f)) // negate on positive matrix diagonal element
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norm.applyTransform(transform::Neg, norm); // *= -1.f;//-norm.t<T>(0);
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e.p(k, norm); // e - is filled by 0 vector except diagonal element (filled by 1)
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e += currentColumn; // e[i] = x[i] + a * e[i] for each i from 0 to n - 1
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auto normE = e.reduceAlongDimension(reduce::Norm2, {0});
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e /= normE;
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q[k] = vmul<T>(context, e, M);
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auto qQ = z.ulike();
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MmulHelper::matmul(&q[k], &z, &qQ, false, false);
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z = std::move(qQ);
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}
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resQ.assign(q[0]); //
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// MmulHelper::matmul(&q[0], matrix, &resR, false, false);
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for (int i = 1; i < N && i < M - 1; i++) {
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auto tempResQ = resQ;
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MmulHelper::matmul(&q[i], &resQ, &tempResQ, false, false);
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resQ = std::move(tempResQ);
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}
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MmulHelper::matmul(&resQ, matrix, &resR, false, false);
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// resR *= -1.f;
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resQ.transposei();
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if (fullMatricies) {
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Q->assign(resQ);
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R->assign(resR);
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}
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else {
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Q->assign(resQ({0, 0, 0, N}));
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R->assign(resR({0, N, 0, 0}));
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}
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}
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template <typename T>
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void qr_(LaunchContext* context, NDArray const* input, NDArray* outputQ, NDArray* outputR, bool const fullMatricies) {
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Nd4jLong lastDim = input->rankOf() - 1;
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Nd4jLong preLastDim = input->rankOf() - 2;
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NDArray::prepareSpecialUse({outputQ, outputR}, {input});
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ResultSet listOutQ(outputQ->allTensorsAlongDimension({(int)preLastDim, (int)lastDim}));
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ResultSet listOutR(outputR->allTensorsAlongDimension({(int)preLastDim, (int)lastDim}));
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ResultSet listInput(input->allTensorsAlongDimension({(int)preLastDim, (int)lastDim}));
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auto start = 0;
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auto stop = listInput.size();
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auto increment = 1;
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for (auto batch = start; batch < stop; batch += increment) {
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//qr here
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qrSingle<T>(context, listInput.at(batch), listOutQ.at(batch), listOutR.at(batch), fullMatricies);
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}
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NDArray::registerSpecialUse({outputQ, outputR}, {input});
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}
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void qr(sd::LaunchContext* context, NDArray const* input, NDArray* outputQ, NDArray* outputR, bool const fullMatricies) {
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BUILD_SINGLE_SELECTOR(input->dataType(), qr_, (context, input, outputQ, outputR, fullMatricies), FLOAT_TYPES);
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}
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}
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}
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}
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