raver119 53ca9a76e8
[WIP] multi-device support (#80)
* fix pad javadoc and @see links. (#72)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* [WIP] More fixes (#73)

* special tests for ConstantTadHelper/ConstantShapeHelper

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* release methods for data buffers

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* delete temporary buffer Java side

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* delete temporary buffer Java side

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* delete temporary TadPack C++/Java side (#74)

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* Zoo model TF import test updates (#75)

* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers

* - new NDArray methods like()/ulike() (#77)

- fix for depthwise_conv2d_bp + special test

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* upsampling2d fix CUDA

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* DL4J trace logging (#79)

* MLN/CG trace logging for debugging

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* Tiny tweak

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* strided_slice_bp shape fn leak fix

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* SameDiff fixes and naming (#78)

* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching

* initial commit

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* initial commit

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* fix javadoc. (#76)

* fix javadoc.

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* replace most @see with @link s.

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* 4 additional tests

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* launch context reorganization

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* LaunchContext reorganization

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* per-device LaunchContext

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* Various DL4J/ND4J fixes (#81)

* #7954 Force refresh of UI when switching tabs on overview page

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* #8017 Concurrent modification exception (synchronize) fix

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* #8033 Don't initialize updater in middle of writing memory crash dump

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* #8208 Fix shape checks for ND4J int[] creator methods

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* #6385 #7992 Keras import naming fixes + cleanup

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* #8016 Upsampling3D - add NDHWC format support

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* ContextBuffers as separate entity

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* Refactor NativeOps.h to export C functions

* Actually export functions from NativeOps.h

* Adapt the Java wrappers in ND4J generated with JavaCPP

* Create C wrappers for some of the C++ classes currently used by ND4J

* ContextBuffers as separate entity

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* remove duplicate code in createBufferDetached. (#83)

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* Keras model import - updater lr fix (#84)

* Keras model import - updater lr fix

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* Keras model import - updater lr fix, cleanup

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* ContextBuffers as separate entity

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* ContextBuffers as separate entity

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* Fix functions of OpaqueVariablesSet

* thread-local buffers/affinity

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* thread safety for LaunchContext

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* more of thread safety

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* one more multi threaded test

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* SameDiff Convolution Config validation, better output methods (#82)

* Conv Config validation & tests

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* stackOutputs utility method

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* use constructor for validation, support negative kernel sizes (infered from weights)

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* better output methods

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* move output to be with fit and evaluate

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* fixes

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* more fixes

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* refactor duplicate code from pad methods. (#86)

* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

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* Various ND4J/DL4J fixes and improvements (#87)

* Reshape and reallocate - small fixes

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* Reshape and reallocate - small fixes

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* #6488 ElementWiseVertex broadcast support

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* Constructors and broadcast supported it Transforms.max/min

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* #8054 ElementWiseVertex now supports broadcast inputs

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* #8057 Nd4j.create overload dtype fix

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* #7551 ND4J Shape validation fix

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* [WIP] Numpy boolean import (#91)

* numpy bool type

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* numpy bool java side

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* remove create method with unused parameter. (#89)

* remove create method with unused parameter.

* removed more unused methods.

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* removing more unused code.

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* last removal of unused code.

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* remove createSparse methods. (#92)

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* Various ND4J/DL4J fixes (#90)

* Deprecate Old*Op instances

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* #8063 #8054 Broadcast exceptions + cleanup inplace ops

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* Small fix

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* Remove bad test condition

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* #7993 Fix shape function issue in crop_and_resize op

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* DL4J SameDiff lambda layer fix

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* #8029 Fix for pnorm backprop math

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* #8038 Fix Op profiler NaN/Inf triggering + add tests (#93)

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* createUninitializedDetached refactoring. (#94)

* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

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* createUninitializedDetached refactored.

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* cuda build fix for issues introduced by recent refactoring

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* [WIP] More of CUDA (#95)

* initial commit

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* Implementation of hashcode cuda helper. Working edition.

* Fixed parallel test input arangements.

* Fixed tests for hashcode op.

* Fixed shape calculation for image:crop_and_resize op and test.

* NativeOps tests. Initial test suite.

* Added tests for indexReduce methods.

* Added test on execBroadcast with NDArray as dimensions.

* Added test on execBroadcastBool with NDArray as dimensions.

* Added tests on execPairwiseTransform and execPairwiseTransofrmBool.

* Added tests for execReduce with scalar results.

* Added reduce tests for non-empty dims array.

* Added tests for reduce3.

* Added tests for execScalar.

* Added tests for execSummaryStats.

* - provide cpu/cuda code for batch_to_space
- testing it

Signed-off-by: Yurii <yurii@skymind.io>

* - remove old test for batch_to_space (had wrong format and numbers were not checked)

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed complilation errors with test.

* Added test for execTransformFloat.

* Added test for execTransformSame.

* Added test for execTransformBool.

* Added test for execTransformStrict.

* Added tests for execScalar/execScalarBool with TADs.

* Added test for flatten.

* - provide cpu/cuda code for space_to_Batch operaion

Signed-off-by: Yurii <yurii@skymind.io>

* Added test for concat.

* comment unnecessary stuff in s_t_b

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* Added test for specialConcat.

* Added tests for memcpy/set routines.

* Fixed pullRow cuda test.

* Added pullRow test.

* Added average test.

* - correct typo in NDArray::applyPairwiseTransform(nd4j::pairwise::BoolOps op...)

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* - debugging and fixing cuda tests in JavaInteropTests file

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* - correct some tests

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* Added test for shuffle.

* Fixed ops declarations.

* Restored omp and added shuffle test.

* Added convertTypes test.

* Added tests for execRandom. Eliminated usage of RandomBuffer with NativeOps.

* Added sort tests.

* Added tests for execCustomOp.

* - further debuging and fixing tests terminated with crash

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* Added tests for calculateOutputShapes.

* Addded Benchmarks test.

* Commented benchmark tests.

* change assertion

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* Added tests for apply_sgd op. Added cpu helper for that op.

* Implement cuda helper for aplly_sgd op. Fixed tests for NativeOps.

* Added test for assign broadcastable.

* Added tests for assign_bp op.

* Added tests for axpy op.

* - assign/execScalar/execTransformAny signature change
- minor test fix

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* Fixed axpy op.

* meh

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* - fix tests for nativeOps::concat

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* sequential transform/scalar

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* allow nested parallelism

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* assign_bp leak fix

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* block setRNG fix

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* enable parallelism by default

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* enable nested parallelism by default

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* Added cuda implementation for row_count helper.

* Added implementation for tnse gains op helper.

* - take into account possible situations when input arrays are empty in reduce_ cuda stuff

Signed-off-by: Yurii <yurii@skymind.io>

* Implemented tsne/edge_forces op cuda-based helper. Parallelized cpu-based helper for edge_forces.

* Added kernel for tsne/symmetrized op heleper.

* Implementation of tsne/symmetrized op cuda helper. Working edition.

* Eliminated waste printfs.

* Added test for broadcastgradientargs op.

* host-only fallback for empty reduce float

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* - some tests fixes

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* - correct the rest of reduce_ stuff

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* - further correction of reduce_ stuff

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* Added test for Cbow op. Also added cuda implementation for cbow helpers.

* - improve code of stack operation for scalar case

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* - provide cuda kernel for gatherND operation

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* Implementation of cbow helpers with cuda kernels.

* minor tests tweaks

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* minor tests tweaks

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* - further correction of cuda stuff

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* Implementatation of cbow op helper with cuda kernels. Working edition.

* Skip random testing for cudablas case.

* lstmBlockCell context fix

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* Added tests for ELU and ELU_BP ops.

* Added tests for eq_scalar, gt_scalar, gte_scalar and lte_scalar ops.

* Added tests for neq_scalar.

* Added test for noop.

* - further work on clipbynorm_bp

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* - get rid of concat op call, use instead direct concat helper call

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* lstmBlockCell context fix

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* Added tests for lrelu and lrelu_bp.

* Added tests for selu and selu_bp.

* Fixed lrelu derivative helpers.

* - some corrections in lstm

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* operator * result shape fix

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* - correct typo in lstmCell

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* few tests fixed

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* CUDA inverse broadcast bool fix

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* disable MMAP test for CUDA

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* BooleanOp syncToDevice

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* meh

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* additional data types for im2col/col2im

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* Added test for firas_sparse op.

* one more RandomBuffer test excluded

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* Added tests for flatten op.

* Added test for Floor op.

* bunch of tests fixed

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* mmulDot tests fixed

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* more tests fixed

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* Implemented floordiv_bp op and tests.

* Fixed scalar case with cuda implementation for bds.

* - work on cuda kernel for clip_by_norm backprop op is completed

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* Eliminate cbow crach.

* more tests fixed

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* more tests fixed

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* Eliminated abortion with batched nlp test.

* more tests fixed

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* Fixed shared flag initializing.

* disabled bunch of cpu workspaces tests

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* scalar operators fix: missing registerSpecialUse call

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* Fixed logdet for cuda and tests.

* - correct clipBynorm_bp

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* Fixed crop_and_resize shape datatype.

* - correct some mmul tests

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* build fix

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* exclude two methods for JNI

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* exclude two methods for JNI

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* exclude two methods for JNI (#97)

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* temporary stack fix

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* round robin affinity test

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* get rid of legacy CudaContext methods

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* get rid of legacy ContextPool classes/methods

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* one legacy test removed

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* few more fields rearranged

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* OpaqueLaunchContext

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* OpaqueLaunchContext++

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* more of OpaqueLaunchContext methods

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* LaunchContext -> CudaContext

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* AffinityManger changes

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* AffinityManger changes

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* cusolver handles

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* typo

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* cusolver method

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* cusolver handle propagated

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* blas/solver handles

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* one more test

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* legacy concat implementations replaced with new CustomOp

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* one more test

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* concat now uses way more blocks

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* print

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* no more triple template mmul

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* bunch of kernels have dtypes reconsidered

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* bunch of kernels have dtypes reconsidered

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* bitonic sort reorganized

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* bunch of cpu stuff removed from cuda scope

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* bunch of cpu stuff removed from cuda scope

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* type conversions moved to generic impl

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* cpu data types pass

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* non_max_suppression

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* sortByValue fix

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* ignore all mixed datatype tests for mmul

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* special handling of OpProfiler exceptions

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* - one failing concat test in cpp
- Nd4j.tile now uses op internally

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* get back dtype exception for legacy arrays deserialization

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2019-08-14 16:52:34 +03:00

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/*******************************************************************************
* Copyright (c) 2015-2018 Skymind, Inc.
*
* This program and the accompanying materials are made available under the
* terms of the Apache License, Version 2.0 which is available at
* https://www.apache.org/licenses/LICENSE-2.0.
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
* License for the specific language governing permissions and limitations
* under the License.
*
* SPDX-License-Identifier: Apache-2.0
******************************************************************************/
//
// @author Yurii Shyrma, created on 25.02.2018
//
#include<ops/declarable/helpers/batchnorm.h>
#include <helpers/ShapeUtils.h>
#include <OmpLaunchHelper.h>
#include <ConstantTadHelper.h>
#include <PointersManager.h>
namespace nd4j {
namespace ops {
namespace helpers {
//////////////////////////////////////////////////////////////////////////
template<typename T>
__global__ static void batchnormCuda(const void* vx, const Nd4jLong* xShapeInfo,
const void* vMean, const Nd4jLong* meanShapeInfo,
const void* vVariance, const Nd4jLong* varianceShapeInfo,
const void* vGamma, const Nd4jLong* gammaShapeInfo,
const void* vBeta, const Nd4jLong* betaShapeInfo,
void* vz, const Nd4jLong* zShapeInfo,
const Nd4jLong* xTadShapeInfo, const Nd4jLong* xTadOffsets,
const Nd4jLong* zTadShapeInfo, const Nd4jLong* zTadOffsets,
const T epsilon) {
const auto x = reinterpret_cast<const T*>(vx);
auto z = reinterpret_cast<T*>(vz);
const auto mean = reinterpret_cast<const T*>(vMean);
const auto variance = reinterpret_cast<const T*>(vVariance);
const auto gamma = reinterpret_cast<const T*>(vGamma);
const auto beta = reinterpret_cast<const T*>(vBeta);
// maxRank = xRank = zRank, minRank = meanRank = varianceRank = gammaRank = betaRank
__shared__ Nd4jLong minLen, tadLen, totalThreads;
if (threadIdx.x == 0) {
totalThreads = gridDim.x * blockDim.x;
minLen = shape::length(meanShapeInfo);
tadLen = shape::length(xShapeInfo) / minLen;
}
__syncthreads();
const auto tid = blockIdx.x * blockDim.x + threadIdx.x;
for (uint i = tid; i < minLen; i += totalThreads) {
const auto meanOffset = shape::getIndexOffset(i, meanShapeInfo, minLen);
const auto varianceOffset = shape::getIndexOffset(i, varianceShapeInfo, minLen);
T sigmaInvGam = 1. / nd4j::math::nd4j_sqrt<T, T>(variance[varianceOffset] + epsilon);
if(gamma != nullptr)
sigmaInvGam *= gamma[shape::getIndexOffset(i, gammaShapeInfo, minLen)];
auto betaOffset = 0;
if(beta != nullptr)
betaOffset = shape::getIndexOffset(i, betaShapeInfo, minLen);
const auto xTad = x + xTadOffsets[i];
auto zTad = z + zTadOffsets[i];
for (uint j = 0; j < tadLen; ++j) {
const auto xTadOffset = shape::getIndexOffset(j, xTadShapeInfo, tadLen);
const auto zTadOffset = shape::getIndexOffset(j, zTadShapeInfo, tadLen);
zTad[zTadOffset] = (xTad[xTadOffset] - mean[meanOffset]) * sigmaInvGam;
if(beta != nullptr)
zTad[zTadOffset] += beta[betaOffset];
}
}
}
//////////////////////////////////////////////////////////////////////////
template<typename T>
__global__ static void batchnormCuda2(const void* vx, const Nd4jLong* xShapeInfo,
const void* vMean, const Nd4jLong* meanShapeInfo,
const void* vVariance, const Nd4jLong* varianceShapeInfo,
const void* vGamma, const Nd4jLong* gammaShapeInfo,
const void* vBeta, const Nd4jLong* betaShapeInfo,
void* vz, const Nd4jLong* zShapeInfo,
const int numDims, const int* dims,
const T epsilon) {
const auto x = reinterpret_cast<const T*>(vx);
auto z = reinterpret_cast<T*>(vz);
const auto mean = reinterpret_cast<const T*>(vMean);
const auto variance = reinterpret_cast<const T*>(vVariance);
const auto gamma = reinterpret_cast<const T*>(vGamma);
const auto beta = reinterpret_cast<const T*>(vBeta);
__shared__ int xRank, minRank; // xRank == zRank. minRank = meanRank = varianceRank = gammaRank = betaRank
__shared__ Nd4jLong xLen, totalThreads, *sharedMem; // xLen = zLen
if (threadIdx.x == 0) {
extern __shared__ unsigned char shmem[];
sharedMem = reinterpret_cast<Nd4jLong*>(shmem);
totalThreads = gridDim.x * blockDim.x;
xLen = shape::length(xShapeInfo);
xRank = shape::rank(xShapeInfo);
minRank = shape::rank(meanShapeInfo);
}
__syncthreads();
auto coords = sharedMem + threadIdx.x * xRank;
const auto tid = blockIdx.x * blockDim.x + threadIdx.x;
for (uint i = tid; i < xLen; i += totalThreads) {
shape::index2coords(xRank, shape::shapeOf(const_cast<Nd4jLong*>(xShapeInfo)), i, xLen, coords);
const auto xOffset = shape::getOffset(0, shape::shapeOf(const_cast<Nd4jLong*>(xShapeInfo)), shape::stride(const_cast<Nd4jLong*>(xShapeInfo)), coords, xRank);
const auto zOffset = shape::getOffset(0, shape::shapeOf(const_cast<Nd4jLong*>(zShapeInfo)), shape::stride(const_cast<Nd4jLong*>(zShapeInfo)), coords, xRank);
if(minRank == xRank) {
for (uint i = 0, j = 0; i < xRank; ++i) {
if(j < numDims && i != dims[j])
coords[i] = 0;
else
++j;
}
}
else // minRank = numDims = 1 in this case
coords[0] = coords[dims[0]];
const auto meanOffset = shape::getOffset(0, shape::shapeOf(const_cast<Nd4jLong*>(meanShapeInfo)), shape::stride(const_cast<Nd4jLong*>(meanShapeInfo)), coords, minRank);
const auto varianceOffset = shape::getOffset(0, shape::shapeOf(const_cast<Nd4jLong*>(varianceShapeInfo)), shape::stride(const_cast<Nd4jLong*>(varianceShapeInfo)), coords, minRank);
T sigmaInvGam = 1. / nd4j::math::nd4j_sqrt<T, T>(variance[varianceOffset] + epsilon);
if(gamma != nullptr) {
const auto gammaOffset = shape::getOffset(0, shape::shapeOf(const_cast<Nd4jLong*>(gammaShapeInfo)), shape::stride(const_cast<Nd4jLong*>(gammaShapeInfo)), coords, minRank);
sigmaInvGam *= gamma[gammaOffset];
}
z[zOffset] = (x[xOffset] - mean[meanOffset]) * sigmaInvGam;
if(beta != nullptr) {
const auto betaOffset = shape::getOffset(0, shape::shapeOf(const_cast<Nd4jLong*>(betaShapeInfo)), shape::stride(const_cast<Nd4jLong*>(betaShapeInfo)), coords, minRank);
z[zOffset] += beta[betaOffset];
}
}
}
///////////////////////////////////////////////////////////////////
template<typename T>
__host__ static void batchnormCudaLauncher(const int blocksPerGrid, const int threadsPerBlock, const cudaStream_t *stream,
const void* vx, const Nd4jLong* xShapeInfo,
const void* vMean, const Nd4jLong* meanShapeInfo,
const void* vVariance, const Nd4jLong* varianceShapeInfo,
const void* vGamma, const Nd4jLong* gammaShapeInfo,
const void* vBeta, const Nd4jLong* betaShapeInfo,
void* vz, const Nd4jLong* zShapeInfo,
const Nd4jLong* xTadShapeInfo, const Nd4jLong* xTadOffsets,
const Nd4jLong* zTadShapeInfo, const Nd4jLong* zTadOffsets,
const double epsilon) {
batchnormCuda<T><<<blocksPerGrid, threadsPerBlock, 1024, *stream>>>(vx, xShapeInfo, vMean, meanShapeInfo, vVariance, varianceShapeInfo, vGamma, gammaShapeInfo, vBeta, betaShapeInfo, vz, zShapeInfo, xTadShapeInfo, xTadOffsets, zTadShapeInfo, zTadOffsets, static_cast<T>(epsilon));
}
///////////////////////////////////////////////////////////////////
template<typename T>
__host__ static void batchnormCudaLauncher2(const int blocksPerGrid, const int threadsPerBlock, const int sharedMem, const cudaStream_t *stream,
const void* vx, const Nd4jLong* xShapeInfo,
const void* vMean, const Nd4jLong* meanShapeInfo,
const void* vVariance, const Nd4jLong* varianceShapeInfo,
const void* vGamma, const Nd4jLong* gammaShapeInfo,
const void* vBeta, const Nd4jLong* betaShapeInfo,
void* vz, const Nd4jLong* zShapeInfo,
const int numDims, const int* dims,
const double epsilon) {
batchnormCuda2<T><<<blocksPerGrid, threadsPerBlock, sharedMem, *stream>>>(vx, xShapeInfo, vMean, meanShapeInfo, vVariance, varianceShapeInfo, vGamma, gammaShapeInfo, vBeta, betaShapeInfo, vz, zShapeInfo, numDims, dims, static_cast<T>(epsilon));
}
//////////////////////////////////////////////////////////////////////////
void batchnorm(const NDArray* input, const NDArray* mean, const NDArray* variance, const NDArray* gamma, const NDArray* beta, NDArray* output, const std::vector<int>& axes, const double epsilon) {
std::vector<int> dimsToExclude = ShapeUtils::evalDimsToExclude(input->rankOf(), axes);
auto packX = nd4j::ConstantTadHelper::getInstance()->tadForDimensions(input->getShapeInfo(), dimsToExclude);
auto packZ = nd4j::ConstantTadHelper::getInstance()->tadForDimensions(output->shapeInfo(), dimsToExclude);
const int threadsPerBlock = MAX_NUM_THREADS / 2;
const int blocksPerGrid = (mean->lengthOf() + threadsPerBlock - 1) / threadsPerBlock;
PointersManager manager(input->getContext(), "batchnorm");
NDArray::prepareSpecialUse({output}, {input, mean, variance, gamma, beta});
BUILD_SINGLE_SELECTOR(input->dataType(), batchnormCudaLauncher, (blocksPerGrid, threadsPerBlock, input->getContext()->getCudaStream(), input->getSpecialBuffer(), input->getSpecialShapeInfo(), mean->getSpecialBuffer(), mean->getSpecialShapeInfo(), variance->getSpecialBuffer(), variance->getSpecialShapeInfo(), gamma ? gamma->getSpecialBuffer() : nullptr, gamma ? gamma->getSpecialShapeInfo() : nullptr, beta ? beta->getSpecialBuffer() : nullptr, beta ? beta->getSpecialShapeInfo() : nullptr, output->specialBuffer(), output->specialShapeInfo(), packX.platformShapeInfo(), packX.platformOffsets(), packZ.platformShapeInfo(), packZ.platformOffsets(), epsilon), FLOAT_TYPES);
NDArray::registerSpecialUse({output}, {input, mean, variance, gamma, beta});
manager.synchronize();
// const int threadsPerBlock = MAX_NUM_THREADS / 4;
// const int blocksPerGrid = (input->lengthOf() + threadsPerBlock - 1) / threadsPerBlock;
// const int sharedMem = sizeof(Nd4jLong) * threadsPerBlock * input->rankOf() + 128;
// PointersManager manager(input->getContext(), "batchnorm");
// const int* dims = reinterpret_cast<int*>(manager.replicatePointer(axes.data(), axes.size() * sizeof(int)));
// NDArray::prepareSpecialUse({output}, {input, mean, variance, gamma, beta});
// BUILD_SINGLE_SELECTOR(input->dataType(), batchnormCudaLauncher2, (blocksPerGrid, threadsPerBlock, sharedMem, input->getContext()->getCudaStream(), input->getSpecialBuffer(), input->getSpecialShapeInfo(), mean->getSpecialBuffer(), mean->getSpecialShapeInfo(), variance->getSpecialBuffer(), variance->getSpecialShapeInfo(), gamma ? gamma->getSpecialBuffer() : nullptr, gamma ? gamma->getSpecialShapeInfo() : nullptr, beta ? beta->getSpecialBuffer() : nullptr, beta ? beta->getSpecialShapeInfo() : nullptr, output->specialBuffer(), output->specialShapeInfo(), axes.size(), dims, epsilon), FLOAT_TYPES);
// NDArray::registerSpecialUse({output}, {input, mean, variance, gamma, beta});
// manager.synchronize();
}
}
}
}