Commit Graph

404 Commits (ef665bfe49b7d6e7e34b69aba6c7b51fa9461827)

Author SHA1 Message Date
raver119 243bf866c4
[WIP] Few fixes (#153)
* throw exception if op execution failed

Signed-off-by: raver119 <raver119@gmail.com>

* expected for test

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* one more ismax test

Signed-off-by: raver119 <raver119@gmail.com>

* ismax view fix

Signed-off-by: raver119 <raver119@gmail.com>
2019-08-23 09:00:10 +03:00
Alex Black 80d35377d4
SameDiff cleanup and fixes (#150)
* Cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* SDVariable no longer extends DifferentialFunction

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8123 Remove cloning library to avoid 'illegal reflective access' warnings

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8095 Make Pooling3D abstract, fix flatbuffers serialization issue

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8117 WordVectorSerializer deprecated method javadoc

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Final fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* One more

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-23 15:09:53 +10:00
raver119 930b49e87f
[WIP] DeviceLocalNDArray updates (#149)
* ContextBuffers are released upon device change

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* DeviceLocalNDArray updates + tests

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* special array for delayed mode

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* additional detach()

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2019-08-22 20:01:29 +03:00
Robert Altena c523aa792f
removr trueVector. (#146)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-22 19:27:43 +09:00
Alex Black 9c2bfc9863
Various fixes (DL4J, ND4J) (#147)
* Import fixes, IsMax dtype calc, small test fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* SubsamplingLayer fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J - SpaceToBatch layer updates

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-22 16:16:03 +10:00
Robert Altena ca7e5593ec
ND4J: Remove Nd4j.trueScalar/trueVector (#145)
* merge conflict.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove/replace trueVector

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-22 10:49:30 +09:00
Ryan Nett 2b0d7b3b52
[WIP] Various fixes, mostly SameDiff/Nd4j (#110)
* Nd4j pad update

Signed-off-by: Ryan Nett <rnett@skymind.io>

* switched from guava Immutables to Collections.unmodifiableList/Map

Signed-off-by: Ryan Nett <rnett@skymind.io>

* javadoc

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use new pad

Signed-off-by: Ryan Nett <rnett@skymind.io>

* conv tests use OpValidation

Signed-off-by: Ryan Nett <rnett@skymind.io>

* deconv3d overrides

Signed-off-by: Ryan Nett <rnett@skymind.io>

* test fix for the new pad method

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more test fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more test fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* rename SameDiff function methods to op (except for the actual SameDiff function ones)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more pad overloads, test fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* test updates

Signed-off-by: Ryan Nett <rnett@skymind.io>

* conv1d test

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove Conv1D tf import (there isn't a TF conv1d op)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove numThreads from Nd4j

Signed-off-by: Ryan Nett <rnett@skymind.io>

* replace Old ops with their newer versions, deprecate ones that haven't already been deprecated

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove use of setNumThreads

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix for Reverse and ATan2

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix test for wrong equals type

Signed-off-by: Ryan Nett <rnett@skymind.io>

* well it works now

Signed-off-by: Ryan Nett <rnett@skymind.io>

* better javadocs

Signed-off-by: Ryan Nett <rnett@skymind.io>

* NonNulls

Signed-off-by: Ryan Nett <rnett@skymind.io>

* better array literal

Signed-off-by: Ryan Nett <rnett@skymind.io>

* re-add tf import stuff (will remove later)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* conv1d config load fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* partial config usage changes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove Old op classes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* config property fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* removed one too many ops

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-08-21 16:40:32 -07:00
raver119 d9ab299759
[WIP] Minor fixes (#140)
* - Tile java shape fn removed
- Tile 0 validation added
- scatter_upd test

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* additional tile validation

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* - provide vector case in cuda scatter op

Signed-off-by: Yurii <yurii@skymind.io>

* cpu ismax view fix

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* exp

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* cuda ismax fix

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2019-08-21 15:05:47 +03:00
Alex Black a5867bb527
Upgrade Jersey to 2.29 (#139)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-21 18:34:49 +10:00
raver119 77805cb7fa
[WIP] cpu ismax fix (#137)
* cpu ismax fix

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* bunch of smaller scalar tests

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2019-08-21 10:12:11 +03:00
raver119 4211f3b4ce one more scalar constructor fix
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2019-08-21 08:53:36 +03:00
raver119 3f4379927a scalar constructor fix
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2019-08-21 08:50:59 +03:00
raver119 4310e87860 include path fix for java
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2019-08-21 07:32:21 +03:00
raver119 269d508ba5
[WIP] cross-device migrations (#134)
* two more tests fixed

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* CUDA device afinity tweaks

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* minor tweaks

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* prepareAction/registerAction for CustomOps

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* lazy allocate host bufer before relocation

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* one special test for migration in cpp

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* tests update for msvc

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* logging

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* stick to old col2im impl

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* cudaStreams reorganization

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* buffer size fix

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* c++ data migration

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* fix CropAndResize test

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* - minor improvment

Signed-off-by: Yurii <yurii@skymind.io>
2019-08-20 18:52:41 +03:00
raver119 23c8738d4a
syncthreads (#136)
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-20 18:28:43 +03:00
Robert Altena 38310777ee
fix for eclipse#8087 (#129)
*  fix for #8087

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove commented code.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* removing trueScalar.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove tueScalar.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-20 15:20:40 +09:00
Alexander Stoyakin 10d676e0b8 [WIP] nd4s - Scala operators for SameDiff (#113)
* Jar packaging for maven

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Typo fixed

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* minimal viable prototype for SD

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Tests corrected

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* few fixes for bfloat16 in java and cpp (#114)

Signed-off-by: raver119 <raver119@gmail.com>

* Nd4j refactoring (#112)

* refactoring

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

* fix: make test public.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* make test public.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* fixes read refactoring.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Enabled test

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Test copied from nd4j

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* [WIP] bitwise ops (#115)

* - cyclic_shift_bits + test
- shift_bits + test

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* OMP_IF replacement

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* Thin wrapper added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Cleanup

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Shugeo cuda tests (#116)

* Added tests for get_seed/set_seed ops.

* Added missed tests for scatter_sub/mul/div ops.

* Added tests for hardsigmoid and hardsigmoid_bp.

* Added tests for hardtanh and hardtanh_bp ops.

* Added test for histogram op.

* Added tests for identity op.

* Refactored mergemaxindex op. Added tests for log1p,mergemaxindex, mod and mod_bp ops.

* Fixed tests for FloorDiv.

* Added test for rank op.

* Added tests for rationaltanh/rationaltanh_bp ops.

* Added tests for realdiv/realdiv_bp.

* Added tests for rectifiedtanh/_bp ops.

* Added tests for shapes_of op.

* Added tests for shapes_of op.

* Added tests for size op.

* Added tests for softplus/_bp ops.

* Added tests for softsign/_bp ops.

* Added tests for toggle_bits op. Fixed processing of OP_IMPL and so on defititions.

* Added test for truncatediv op.

* Added another test for truncatediv op.

* Added another test for histogram.

* Added tests for unstack_list op.

* Refactored to_int32/uint32/float16/float32/double/int64/uint64 ops and tests.

* Refactored mergemaxindex op helper for cuda platform and tests.

* Fixed cuda kernel for histogram op helper.

* Refactor skipgram to avoid early buffers shift.

* Fixed check up with non_max_suppression op cuda helper. Added cuda kernel implementation for skipgram op helpers.

* Added implementation of skipgram op helper for cuda platform. Working revision

* Fixed mergeMaxIndex kernel and move it to separate source file.

* Adding arithmetic

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Eliminated memory leaks and dropped waste prints with tests. (#117)

* Added tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* fix test

Signed-off-by: raver119 <raver119@gmail.com>

* no openmp for ClipByGlobalNorm

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* Stubs for ops

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* [WIP] right shift ops (#118)

* right shift ops

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* typo

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* rotr test

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* fix: IOException no longer thrown by read(). (#120)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Small fix in TensorflowConversion class (#121)

Signed-off-by: Alex Black <blacka101@gmail.com>

* Shyrma concat2 (#119)

* - rewrite/improve concat

Signed-off-by: Yurii <yurii@skymind.io>

* - ged rid of unnecessary argument in concat kernel

Signed-off-by: Yurii <yurii@skymind.io>

* InferenceSession additional validation for shape calc (#122)

Signed-off-by: Alex Black <blacka101@gmail.com>

* [WIP] build fix (#124)

* AffinityManager changes

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* build fixes

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* OP/CONFIGURABLE_OP shapefn fix (#125)

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* Some ops added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Nd4j refactoring (last one!) (#123)

* fix: IOException no longer thrown by read().

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* refactoring

* last refactorings

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Advanced tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* [WIP] Java wrappers (#126)

* shift/rshift/rotl/rotr java/sd wrappers

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* few additional wrappers

Signed-off-by: raver119 <raver119@gmail.com>

* minor naming tweak

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* Test added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* one more build fix

Signed-off-by: raver119 <raver119@gmail.com>

* Jar packaging for maven

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Typo fixed

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* minimal viable prototype for SD

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Tests corrected

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Enabled test

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Test copied from nd4j

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Thin wrapper added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Cleanup

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Adding arithmetic

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Added tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Stubs for ops

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Some ops added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Advanced tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Test added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Ops added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Small build fixes (#127)

* Small build fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix RL4J

Signed-off-by: Alex Black <blacka101@gmail.com>

* Test fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Another fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* parent module name fix

Signed-off-by: raver119 <raver119@gmail.com>

* [WIP] Roll rewritten (#128)

* Process correct input vector.

* Added tests for roll.

* Refactored roll to conform with TF. Eliminated memory leaks with Roll op tests.

* no thread_local for cpu

Signed-off-by: raver119 <raver119@gmail.com>

* Jar packaging for maven

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Typo fixed

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* minimal viable prototype for SD

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Tests corrected

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Enabled test

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Test copied from nd4j

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Thin wrapper added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Cleanup

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Adding arithmetic

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Added tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Stubs for ops

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Some ops added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Advanced tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Test added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Ops added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Tests added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Boolen logic ops

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Test added

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Shift operations

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>
2019-08-19 16:25:13 +03:00
raver119 b8ab1a00b0 - 2 mod tests
- ModOp mapping added

Signed-off-by: raver119 <raver119@gmail.com>
2019-08-19 12:57:24 +03:00
raver119 aceb915557
[WIP] tests fixes (#130)
* no openmp for ClipByGlobalNorm

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* one more bfloat16 rng test

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* assertion fix

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* - legacy IsMax gone
- linear IsMax gets shapeInfo argument

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* get rid of legacy IsMax tests

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* IsMax is custom op now

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* more blocks for ismax

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* one more test

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*  - sqrt test
 - some legacy code removed from CudaExecutioner
 - Transforms.asin tweaks

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* - TransformFloat fix

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* - ismax fix
- SpaceToBatchND/BatchToSpaceND wrappers
- couple of legacy tests removed

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2019-08-19 11:33:15 +03:00
raver119 e9b72e78ae one more build fix
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-16 15:02:47 +03:00
raver119 3ba616a161
[WIP] Java wrappers (#126)
* shift/rshift/rotl/rotr java/sd wrappers

Signed-off-by: raver119 <raver119@gmail.com>

* few additional wrappers

Signed-off-by: raver119 <raver119@gmail.com>

* minor naming tweak

Signed-off-by: raver119 <raver119@gmail.com>
2019-08-16 13:14:26 +03:00
Robert Altena 7fbc4b0933 Nd4j refactoring (last one!) (#123)
* fix: IOException no longer thrown by read().

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* refactoring

* last refactorings

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-16 16:39:11 +10:00
raver119 2f3d7330ce
[WIP] build fix (#124)
* AffinityManager changes

Signed-off-by: raver119 <raver119@gmail.com>

* build fixes

Signed-off-by: raver119 <raver119@gmail.com>
2019-08-16 08:14:18 +03:00
Alex Black 65ff18383a
InferenceSession additional validation for shape calc (#122)
Signed-off-by: Alex Black <blacka101@gmail.com>
2019-08-16 14:19:06 +10:00
Alex Black b370544b8f
Small fix in TensorflowConversion class (#121)
Signed-off-by: Alex Black <blacka101@gmail.com>
2019-08-16 11:32:02 +10:00
Robert Altena 0a3e78b540 fix: IOException no longer thrown by read(). (#120)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-16 11:19:55 +10:00
raver119 987bb80c46
[WIP] right shift ops (#118)
* right shift ops

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* typo

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* rotr test

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2019-08-15 20:35:15 +03:00
raver119 935cbf5df3 fix test
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2019-08-15 18:19:24 +03:00
Robert Altena 59cba587f4
Nd4j refactoring (#112)
* refactoring

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

* fix: make test public.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* make test public.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* fixes read refactoring.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-15 13:50:52 +09:00
raver119 c7277729e9
few fixes for bfloat16 in java and cpp (#114)
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-14 21:51:42 +03:00
raver119 53ca9a76e8
[WIP] multi-device support (#80)
* fix pad javadoc and @see links. (#72)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* [WIP] More fixes (#73)

* special tests for ConstantTadHelper/ConstantShapeHelper

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* release methods for data buffers

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* delete temporary buffer Java side

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* delete temporary buffer Java side

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* delete temporary TadPack C++/Java side (#74)

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* Zoo model TF import test updates (#75)

* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers

* - new NDArray methods like()/ulike() (#77)

- fix for depthwise_conv2d_bp + special test

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* upsampling2d fix CUDA

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* DL4J trace logging (#79)

* MLN/CG trace logging for debugging

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* Tiny tweak

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* strided_slice_bp shape fn leak fix

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* SameDiff fixes and naming (#78)

* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching

* initial commit

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* initial commit

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* fix javadoc. (#76)

* fix javadoc.

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* replace most @see with @link s.

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* 4 additional tests

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* launch context reorganization

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* LaunchContext reorganization

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* per-device LaunchContext

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* Various DL4J/ND4J fixes (#81)

* #7954 Force refresh of UI when switching tabs on overview page

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* #8017 Concurrent modification exception (synchronize) fix

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* #8033 Don't initialize updater in middle of writing memory crash dump

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* #8208 Fix shape checks for ND4J int[] creator methods

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* #6385 #7992 Keras import naming fixes + cleanup

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* #8016 Upsampling3D - add NDHWC format support

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* ContextBuffers as separate entity

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* Refactor NativeOps.h to export C functions

* Actually export functions from NativeOps.h

* Adapt the Java wrappers in ND4J generated with JavaCPP

* Create C wrappers for some of the C++ classes currently used by ND4J

* ContextBuffers as separate entity

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* remove duplicate code in createBufferDetached. (#83)

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* Keras model import - updater lr fix (#84)

* Keras model import - updater lr fix

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* Keras model import - updater lr fix, cleanup

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* ContextBuffers as separate entity

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* ContextBuffers as separate entity

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* Fix functions of OpaqueVariablesSet

* thread-local buffers/affinity

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* thread safety for LaunchContext

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* more of thread safety

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* one more multi threaded test

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* SameDiff Convolution Config validation, better output methods (#82)

* Conv Config validation & tests

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* stackOutputs utility method

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* use constructor for validation, support negative kernel sizes (infered from weights)

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* better output methods

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* move output to be with fit and evaluate

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* fixes

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* more fixes

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* refactor duplicate code from pad methods. (#86)

* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

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* Various ND4J/DL4J fixes and improvements (#87)

* Reshape and reallocate - small fixes

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* Reshape and reallocate - small fixes

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* #6488 ElementWiseVertex broadcast support

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* Constructors and broadcast supported it Transforms.max/min

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* #8054 ElementWiseVertex now supports broadcast inputs

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* #8057 Nd4j.create overload dtype fix

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* #7551 ND4J Shape validation fix

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* [WIP] Numpy boolean import (#91)

* numpy bool type

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* numpy bool java side

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* remove create method with unused parameter. (#89)

* remove create method with unused parameter.

* removed more unused methods.

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* removing more unused code.

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* last removal of unused code.

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* remove createSparse methods. (#92)

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* Various ND4J/DL4J fixes (#90)

* Deprecate Old*Op instances

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* #8063 #8054 Broadcast exceptions + cleanup inplace ops

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* Small fix

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* Remove bad test condition

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* #7993 Fix shape function issue in crop_and_resize op

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* DL4J SameDiff lambda layer fix

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* #8029 Fix for pnorm backprop math

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* #8038 Fix Op profiler NaN/Inf triggering + add tests (#93)

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* createUninitializedDetached refactoring. (#94)

* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

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* createUninitializedDetached refactored.

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* cuda build fix for issues introduced by recent refactoring

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* [WIP] More of CUDA (#95)

* initial commit

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* Implementation of hashcode cuda helper. Working edition.

* Fixed parallel test input arangements.

* Fixed tests for hashcode op.

* Fixed shape calculation for image:crop_and_resize op and test.

* NativeOps tests. Initial test suite.

* Added tests for indexReduce methods.

* Added test on execBroadcast with NDArray as dimensions.

* Added test on execBroadcastBool with NDArray as dimensions.

* Added tests on execPairwiseTransform and execPairwiseTransofrmBool.

* Added tests for execReduce with scalar results.

* Added reduce tests for non-empty dims array.

* Added tests for reduce3.

* Added tests for execScalar.

* Added tests for execSummaryStats.

* - provide cpu/cuda code for batch_to_space
- testing it

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* - remove old test for batch_to_space (had wrong format and numbers were not checked)

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* Fixed complilation errors with test.

* Added test for execTransformFloat.

* Added test for execTransformSame.

* Added test for execTransformBool.

* Added test for execTransformStrict.

* Added tests for execScalar/execScalarBool with TADs.

* Added test for flatten.

* - provide cpu/cuda code for space_to_Batch operaion

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* Added test for concat.

* comment unnecessary stuff in s_t_b

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* Added test for specialConcat.

* Added tests for memcpy/set routines.

* Fixed pullRow cuda test.

* Added pullRow test.

* Added average test.

* - correct typo in NDArray::applyPairwiseTransform(nd4j::pairwise::BoolOps op...)

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* - debugging and fixing cuda tests in JavaInteropTests file

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* - correct some tests

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* Added test for shuffle.

* Fixed ops declarations.

* Restored omp and added shuffle test.

* Added convertTypes test.

* Added tests for execRandom. Eliminated usage of RandomBuffer with NativeOps.

* Added sort tests.

* Added tests for execCustomOp.

* - further debuging and fixing tests terminated with crash

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* Added tests for calculateOutputShapes.

* Addded Benchmarks test.

* Commented benchmark tests.

* change assertion

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* Added tests for apply_sgd op. Added cpu helper for that op.

* Implement cuda helper for aplly_sgd op. Fixed tests for NativeOps.

* Added test for assign broadcastable.

* Added tests for assign_bp op.

* Added tests for axpy op.

* - assign/execScalar/execTransformAny signature change
- minor test fix

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* Fixed axpy op.

* meh

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* - fix tests for nativeOps::concat

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* sequential transform/scalar

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* allow nested parallelism

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* assign_bp leak fix

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* block setRNG fix

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* enable parallelism by default

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* enable nested parallelism by default

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* Added cuda implementation for row_count helper.

* Added implementation for tnse gains op helper.

* - take into account possible situations when input arrays are empty in reduce_ cuda stuff

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* Implemented tsne/edge_forces op cuda-based helper. Parallelized cpu-based helper for edge_forces.

* Added kernel for tsne/symmetrized op heleper.

* Implementation of tsne/symmetrized op cuda helper. Working edition.

* Eliminated waste printfs.

* Added test for broadcastgradientargs op.

* host-only fallback for empty reduce float

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* - some tests fixes

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* - correct the rest of reduce_ stuff

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* - further correction of reduce_ stuff

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* Added test for Cbow op. Also added cuda implementation for cbow helpers.

* - improve code of stack operation for scalar case

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* - provide cuda kernel for gatherND operation

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* Implementation of cbow helpers with cuda kernels.

* minor tests tweaks

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* minor tests tweaks

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* - further correction of cuda stuff

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* Implementatation of cbow op helper with cuda kernels. Working edition.

* Skip random testing for cudablas case.

* lstmBlockCell context fix

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* Added tests for ELU and ELU_BP ops.

* Added tests for eq_scalar, gt_scalar, gte_scalar and lte_scalar ops.

* Added tests for neq_scalar.

* Added test for noop.

* - further work on clipbynorm_bp

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* - get rid of concat op call, use instead direct concat helper call

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* lstmBlockCell context fix

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* Added tests for lrelu and lrelu_bp.

* Added tests for selu and selu_bp.

* Fixed lrelu derivative helpers.

* - some corrections in lstm

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* operator * result shape fix

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* - correct typo in lstmCell

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* few tests fixed

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* CUDA inverse broadcast bool fix

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* disable MMAP test for CUDA

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* BooleanOp syncToDevice

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* meh

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* additional data types for im2col/col2im

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* Added test for firas_sparse op.

* one more RandomBuffer test excluded

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* Added tests for flatten op.

* Added test for Floor op.

* bunch of tests fixed

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* mmulDot tests fixed

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* more tests fixed

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* Implemented floordiv_bp op and tests.

* Fixed scalar case with cuda implementation for bds.

* - work on cuda kernel for clip_by_norm backprop op is completed

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* Eliminate cbow crach.

* more tests fixed

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* more tests fixed

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* Eliminated abortion with batched nlp test.

* more tests fixed

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* Fixed shared flag initializing.

* disabled bunch of cpu workspaces tests

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* scalar operators fix: missing registerSpecialUse call

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* Fixed logdet for cuda and tests.

* - correct clipBynorm_bp

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* Fixed crop_and_resize shape datatype.

* - correct some mmul tests

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* build fix

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* exclude two methods for JNI

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* exclude two methods for JNI

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* exclude two methods for JNI (#97)

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* temporary stack fix

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* round robin affinity test

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* get rid of legacy CudaContext methods

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* get rid of legacy ContextPool classes/methods

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* one legacy test removed

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* few more fields rearranged

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* OpaqueLaunchContext

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* OpaqueLaunchContext++

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* more of OpaqueLaunchContext methods

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* LaunchContext -> CudaContext

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* AffinityManger changes

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* AffinityManger changes

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* cusolver handles

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* typo

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* cusolver method

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* cusolver handle propagated

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* blas/solver handles

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* one more test

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* legacy concat implementations replaced with new CustomOp

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* one more test

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* concat now uses way more blocks

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* print

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* no more triple template mmul

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* bunch of kernels have dtypes reconsidered

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* bunch of kernels have dtypes reconsidered

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* bitonic sort reorganized

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* bunch of cpu stuff removed from cuda scope

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* bunch of cpu stuff removed from cuda scope

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* type conversions moved to generic impl

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* cpu data types pass

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* non_max_suppression

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* sortByValue fix

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* ignore all mixed datatype tests for mmul

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* special handling of OpProfiler exceptions

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* - one failing concat test in cpp
- Nd4j.tile now uses op internally

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* get back dtype exception for legacy arrays deserialization

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2019-08-14 16:52:34 +03:00
raver119 ec847e034b
[WIP] Remote inference (#96)
* fix pad javadoc and @see links. (#72)

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* [WIP] More fixes (#73)

* special tests for ConstantTadHelper/ConstantShapeHelper

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* release methods for data buffers

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* delete temporary buffer Java side

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* delete temporary buffer Java side

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* delete temporary TadPack C++/Java side (#74)

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* Zoo model TF import test updates (#75)

* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers

* - new NDArray methods like()/ulike() (#77)

- fix for depthwise_conv2d_bp + special test

Signed-off-by: raver119 <raver119@gmail.com>

* upsampling2d fix CUDA

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* DL4J trace logging (#79)

* MLN/CG trace logging for debugging

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Tiny tweak

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* strided_slice_bp shape fn leak fix

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* SameDiff fixes and naming (#78)

* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching

* fix javadoc. (#76)

* fix javadoc.

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* replace most @see with @link s.

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* 4 additional tests

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* Various DL4J/ND4J fixes (#81)

* #7954 Force refresh of UI when switching tabs on overview page

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* #8017 Concurrent modification exception (synchronize) fix

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* #8033 Don't initialize updater in middle of writing memory crash dump

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* #8208 Fix shape checks for ND4J int[] creator methods

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* #6385 #7992 Keras import naming fixes + cleanup

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* #8016 Upsampling3D - add NDHWC format support

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Refactor NativeOps.h to export C functions

* Actually export functions from NativeOps.h

* Adapt the Java wrappers in ND4J generated with JavaCPP

* Create C wrappers for some of the C++ classes currently used by ND4J

* remove duplicate code in createBufferDetached. (#83)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Keras model import - updater lr fix (#84)

* Keras model import - updater lr fix

Signed-off-by: eraly <susan.eraly@gmail.com>

* Keras model import - updater lr fix, cleanup

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* Fix functions of OpaqueVariablesSet

* SameDiff Convolution Config validation, better output methods (#82)

* Conv Config validation & tests

Signed-off-by: Ryan Nett <rnett@skymind.io>

* stackOutputs utility method

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* use constructor for validation, support negative kernel sizes (infered from weights)

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* better output methods

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* move output to be with fit and evaluate

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* fixes

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* more fixes

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* refactor duplicate code from pad methods. (#86)

* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

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* Various ND4J/DL4J fixes and improvements (#87)

* Reshape and reallocate - small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Reshape and reallocate - small fixes

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* #6488 ElementWiseVertex broadcast support

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* Constructors and broadcast supported it Transforms.max/min

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* #8054 ElementWiseVertex now supports broadcast inputs

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* #8057 Nd4j.create overload dtype fix

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* #7551 ND4J Shape validation fix

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* [WIP] Numpy boolean import (#91)

* numpy bool type

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* numpy bool java side

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* remove create method with unused parameter. (#89)

* remove create method with unused parameter.

* removed more unused methods.

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* removing more unused code.

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* last removal of unused code.

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* remove createSparse methods. (#92)

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* Various ND4J/DL4J fixes (#90)

* Deprecate Old*Op instances

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* #8063 #8054 Broadcast exceptions + cleanup inplace ops

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* Small fix

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* Remove bad test condition

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* #7993 Fix shape function issue in crop_and_resize op

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* DL4J SameDiff lambda layer fix

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* #8029 Fix for pnorm backprop math

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* #8038 Fix Op profiler NaN/Inf triggering + add tests (#93)

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* createUninitializedDetached refactoring. (#94)

* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

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* createUninitializedDetached refactored.

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* cuda build fix for issues introduced by recent refactoring

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* initial commit

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* deps tweaks

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* initial prototype

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* modules reorganized

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* gprc module moved to nd4j-remote as well

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* gprc module moved to nd4j-remote as well

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* serving prototype

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* serving prototype

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* serving prototype

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* serving prototype

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* [WIP] More of CUDA (#95)

* initial commit

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* Implementation of hashcode cuda helper. Working edition.

* Fixed parallel test input arangements.

* Fixed tests for hashcode op.

* Fixed shape calculation for image:crop_and_resize op and test.

* NativeOps tests. Initial test suite.

* Added tests for indexReduce methods.

* Added test on execBroadcast with NDArray as dimensions.

* Added test on execBroadcastBool with NDArray as dimensions.

* Added tests on execPairwiseTransform and execPairwiseTransofrmBool.

* Added tests for execReduce with scalar results.

* Added reduce tests for non-empty dims array.

* Added tests for reduce3.

* Added tests for execScalar.

* Added tests for execSummaryStats.

* - provide cpu/cuda code for batch_to_space
- testing it

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* - remove old test for batch_to_space (had wrong format and numbers were not checked)

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* Fixed complilation errors with test.

* Added test for execTransformFloat.

* Added test for execTransformSame.

* Added test for execTransformBool.

* Added test for execTransformStrict.

* Added tests for execScalar/execScalarBool with TADs.

* Added test for flatten.

* - provide cpu/cuda code for space_to_Batch operaion

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* Added test for concat.

* comment unnecessary stuff in s_t_b

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* Added test for specialConcat.

* Added tests for memcpy/set routines.

* Fixed pullRow cuda test.

* Added pullRow test.

* Added average test.

* - correct typo in NDArray::applyPairwiseTransform(nd4j::pairwise::BoolOps op...)

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* - debugging and fixing cuda tests in JavaInteropTests file

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* - correct some tests

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* Added test for shuffle.

* Fixed ops declarations.

* Restored omp and added shuffle test.

* Added convertTypes test.

* Added tests for execRandom. Eliminated usage of RandomBuffer with NativeOps.

* Added sort tests.

* Added tests for execCustomOp.

* - further debuging and fixing tests terminated with crash

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* Added tests for calculateOutputShapes.

* Addded Benchmarks test.

* Commented benchmark tests.

* change assertion

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* Added tests for apply_sgd op. Added cpu helper for that op.

* Implement cuda helper for aplly_sgd op. Fixed tests for NativeOps.

* Added test for assign broadcastable.

* Added tests for assign_bp op.

* Added tests for axpy op.

* - assign/execScalar/execTransformAny signature change
- minor test fix

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* Fixed axpy op.

* meh

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* - fix tests for nativeOps::concat

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* sequential transform/scalar

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* allow nested parallelism

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* assign_bp leak fix

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* block setRNG fix

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* enable parallelism by default

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* enable nested parallelism by default

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* Added cuda implementation for row_count helper.

* Added implementation for tnse gains op helper.

* - take into account possible situations when input arrays are empty in reduce_ cuda stuff

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* Implemented tsne/edge_forces op cuda-based helper. Parallelized cpu-based helper for edge_forces.

* Added kernel for tsne/symmetrized op heleper.

* Implementation of tsne/symmetrized op cuda helper. Working edition.

* Eliminated waste printfs.

* Added test for broadcastgradientargs op.

* host-only fallback for empty reduce float

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* - some tests fixes

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* - correct the rest of reduce_ stuff

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* - further correction of reduce_ stuff

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* Added test for Cbow op. Also added cuda implementation for cbow helpers.

* - improve code of stack operation for scalar case

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* - provide cuda kernel for gatherND operation

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* Implementation of cbow helpers with cuda kernels.

* minor tests tweaks

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* minor tests tweaks

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* - further correction of cuda stuff

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* Implementatation of cbow op helper with cuda kernels. Working edition.

* Skip random testing for cudablas case.

* lstmBlockCell context fix

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* Added tests for ELU and ELU_BP ops.

* Added tests for eq_scalar, gt_scalar, gte_scalar and lte_scalar ops.

* Added tests for neq_scalar.

* Added test for noop.

* - further work on clipbynorm_bp

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* - get rid of concat op call, use instead direct concat helper call

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* lstmBlockCell context fix

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* Added tests for lrelu and lrelu_bp.

* Added tests for selu and selu_bp.

* Fixed lrelu derivative helpers.

* - some corrections in lstm

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* operator * result shape fix

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* - correct typo in lstmCell

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* few tests fixed

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* CUDA inverse broadcast bool fix

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* disable MMAP test for CUDA

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* BooleanOp syncToDevice

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* meh

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* additional data types for im2col/col2im

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* Added test for firas_sparse op.

* one more RandomBuffer test excluded

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* Added tests for flatten op.

* Added test for Floor op.

* bunch of tests fixed

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* mmulDot tests fixed

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* more tests fixed

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* Implemented floordiv_bp op and tests.

* Fixed scalar case with cuda implementation for bds.

* - work on cuda kernel for clip_by_norm backprop op is completed

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* Eliminate cbow crach.

* more tests fixed

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* more tests fixed

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* Eliminated abortion with batched nlp test.

* more tests fixed

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* Fixed shared flag initializing.

* disabled bunch of cpu workspaces tests

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* scalar operators fix: missing registerSpecialUse call

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* Fixed logdet for cuda and tests.

* - correct clipBynorm_bp

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* Fixed crop_and_resize shape datatype.

* - correct some mmul tests

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* build fix

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* exclude two methods for JNI

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* exclude two methods for JNI

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* exclude two methods for JNI (#97)

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* temporary stack fix

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* downgrade jetty to latest stable version

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* test and profiles

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* Servlet skeleton

* one test case

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* one test case

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* compilation fix

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* draft improvements

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* draft improvements

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* proof of concept works

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* proof of concept works

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* Servlet

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* logging + simple timing

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* Content type fixed

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* Profile required

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* Servlet tests

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* Post test

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* Tests added:

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* Minor tweaks

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* Constants used

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* Check content type

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* Some tests

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* Errors checking

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* Constraints and tests

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* Minor tweaks

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* Dl4j servlet skeleton

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* Moving class to dl4j

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* Builder extended

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* initial dl4j commit

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* unirest version change

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* temp fallback

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* Reverted unirest version

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* Reverted unirest version

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* revert back unirest version change

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* revert unirest change

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* some additional checks in builder

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* few more fields

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* Test added

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* lombok

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* Tests added

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* deps

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* profiles re-introduced

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* Added tests

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* Model servlet

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* builders

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* builders

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* Servlet skeleton

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* Servlet tests

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* builders

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* get rid of old class

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* use PI for inference

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* superbuilder

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* get back builder

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* Servlet builder

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* PI setup

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* get rid of superbuilder

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* SameDiffServlet inheritance constructor

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* dl4jservlet attached to samediffservlet

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* builder types fix

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* dummy model

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* single out

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* loss

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* Tests added

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* missed builder type

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* working serving example

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* sd model fix

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* fix unirest version

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* More tests

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* Tests added:

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* Minor tests fixes

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* Tests fixed

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* Build fixed

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* Test added

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* Tests fixed

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* Ser/deser added

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* one more unirest fix

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* Custom serializers

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* Tests disabled

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* revert back unirest version change

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* update

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* some default fields values

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* some comments/javadoc

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* - move serde impls to client module
- get rid of INDArray serde for now

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* jackson-based serde for float[], double[] and String

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* more of basic ser/de + tests

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* minor api changes

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* change imports/signatures

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* Optional parralel inference

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* Insert pause between tests as workaround for unavailable port issue

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* few unused imports removed

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* Models usage

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* Models usage

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* - InputAdapter + OutputAdapter = InferenceAdapter
- JsonModelServer now allows separate configuration of InputAdapter and OutputAdapter

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* unused import

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* input adapter..

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* minor signature change

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* few more signatures updated

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* input/output adapter

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* Tests added

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* javadocs added

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* Test fixed

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* minor polishing

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* more of javadoc

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* signature change

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2019-08-14 12:11:09 +03:00
Robert Altena b10ab239c0 Nd4j refactoring (#111)
* refactoring

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* wip

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* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-13 21:44:40 +10:00
Robert Altena c29c011d1a Nd4j refactoring (#109)
* refactoring.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

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* wip

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* wip

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* review feedback

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2019-08-13 11:30:45 +10:00
Ryan Nett 11bddb3825 SameDiff: Listener changes and training api update (#99)
* example api

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* Lambda based evaluation

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* lambda test

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* fixes

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* partial fixes, use get-variable listener framework, example EvaluationListener

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* javadoc fix and newInstance implementations

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* fit and evaluate methods with validation data (for fit) and listeners

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* output method overloads + listener args

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* history and evaluation helpers

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* fixes

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* more fixes

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* FitConfig and added getters and setters

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* javadocs

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* fixes, javadoc, added activations to history, added latest activation listener

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* fixes, start of tests

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* fixes and updates

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* newInstance fixes, tests

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* test fixes

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* javadocs, getters with SDVariable overrides, CustomEvaluation fix

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* more operation config classes (evaluation, output, exec/single batch output), fix custom eval tests

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* merge fixes

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* fix

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* fixes, most old fit/evaluate/output methods use the builders

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* fixes

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* numerous fixes/cleanup

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* fixes

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* javadoc

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* Polish round 1

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* Round 2

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* Formatting + round 3

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* Round 4

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2019-08-10 15:30:31 +10:00
raver119 62a025439b java cuda compilation fix
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2019-08-07 21:36:27 +03:00
Robert Altena f8615e0ef0
nd4j refactoring. (#103)
Restored writeTxt per slack DM.
2019-08-07 19:31:48 +09:00
Alex Black edb71bf46f
Add SameDiff exec debugging listener + few fixes (#104)
* First pass on SameDiff op exec debug listener

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* #7555 DL4J helpers - don't fall back on builtin for op profiler exceptions

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* Exec debugging listener + fixes

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* Fix import counts for TF ops in OpValidationSuite

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix bad DL4J test configuration

Signed-off-by: Alex Black <blacka101@gmail.com>

* Exec debugging listener polish

Signed-off-by: Alex Black <blacka101@gmail.com>

* Small fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* Another fix

Signed-off-by: Alex Black <blacka101@gmail.com>
2019-08-07 17:18:29 +10:00
Robert Altena ba1d1b160b
remove method with unused parameter. (#102)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-06 19:14:45 +09:00
Robert Altena a438434b1f
Nd4j refactoring (#101)
* cleanup

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-06 16:40:08 +09:00
Alex Black b8846113bd
Small number of fixes + cleanup + some missing op methods + constructors (#100)
* Remove unused op class - DefaultOpConverter

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* Add SDImage class; INDArray constructor additions

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Floordiv

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* Small polish to image methods

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* Small DataVec test fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 22:31:46 +10:00
Alex Black 923ab15583 Small number of fixes (#98)
* Remove no longer functioning LegacyPooling2D class

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix

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* #8066 First steps for reflection scanning - INDArray constructors

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* Small build fix for ND4S

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More nd4s fixes

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2019-08-05 11:28:07 +10:00
raver119 aefdbc17d6 exclude two methods for JNI
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-05 11:27:05 +10:00
raver119 e2b7675e9c build fix
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2019-08-05 11:27:05 +10:00
raver119 e565788329 cuda build fix for issues introduced by recent refactoring
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-05 11:27:05 +10:00
Robert Altena dfec54242d createUninitializedDetached refactoring. (#94)
* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* createUninitializedDetached refactored.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:27:05 +10:00
Alex Black cd41c3540d #8038 Fix Op profiler NaN/Inf triggering + add tests (#93)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:25:48 +10:00
Alex Black e18e2dc014 Various ND4J/DL4J fixes (#90)
* Deprecate Old*Op instances

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* #8063 #8054 Broadcast exceptions + cleanup inplace ops

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* Small fix

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* Remove bad test condition

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* #7993 Fix shape function issue in crop_and_resize op

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* DL4J SameDiff lambda layer fix

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* #8029 Fix for pnorm backprop math

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2019-08-05 11:25:48 +10:00
Robert Altena fbe120031d remove createSparse methods. (#92)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:25:48 +10:00
Robert Altena 386a9f057b remove create method with unused parameter. (#89)
* remove create method with unused parameter.

* removed more unused methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* removing more unused code.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* last removal of unused code.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:25:48 +10:00
raver119 065b34c7cb [WIP] Numpy boolean import (#91)
* numpy bool type

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* numpy bool java side

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2019-08-05 11:25:48 +10:00
Alex Black b95417f7c5 Various ND4J/DL4J fixes and improvements (#87)
* Reshape and reallocate - small fixes

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* Reshape and reallocate - small fixes

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* #6488 ElementWiseVertex broadcast support

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* Constructors and broadcast supported it Transforms.max/min

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* #8054 ElementWiseVertex now supports broadcast inputs

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* #8057 Nd4j.create overload dtype fix

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* #7551 ND4J Shape validation fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:24:20 +10:00
Robert Altena aa4af2c36d refactor duplicate code from pad methods. (#86)
* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:24:20 +10:00
Ryan Nett d4e7997134 SameDiff Convolution Config validation, better output methods (#82)
* Conv Config validation & tests

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* stackOutputs utility method

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* use constructor for validation, support negative kernel sizes (infered from weights)

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* better output methods

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* move output to be with fit and evaluate

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* fixes

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* more fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-08-05 11:24:20 +10:00
Samuel Audet 8d1fe8b1b3 Fix functions of OpaqueVariablesSet 2019-08-05 11:24:20 +10:00
Robert Altena fa98b83295 remove duplicate code in createBufferDetached. (#83)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:22:59 +10:00
Samuel Audet 526b782e51 Create C wrappers for some of the C++ classes currently used by ND4J 2019-08-05 11:22:59 +10:00
Samuel Audet 8881bfe7aa Adapt the Java wrappers in ND4J generated with JavaCPP 2019-08-05 11:22:59 +10:00
Alex Black fad8da878f Various DL4J/ND4J fixes (#81)
* #7954 Force refresh of UI when switching tabs on overview page

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* #8017 Concurrent modification exception (synchronize) fix

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* #8033 Don't initialize updater in middle of writing memory crash dump

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* #8208 Fix shape checks for ND4J int[] creator methods

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* #6385 #7992 Keras import naming fixes + cleanup

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* #8016 Upsampling3D - add NDHWC format support

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:21:23 +10:00
Robert Altena 70dbe70594 fix javadoc. (#76)
* fix javadoc.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace most @see with @link s.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:21:23 +10:00
Ryan Nett ac321265a7 SameDiff fixes and naming (#78)
* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching
2019-08-05 11:21:23 +10:00
Ryan Nett 00e6296140 Zoo model TF import test updates (#75)
* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers
2019-08-05 11:13:41 +10:00
raver119 b9708be5db delete temporary TadPack C++/Java side (#74)
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-05 11:11:22 +10:00
raver119 59a006ce29 [WIP] More fixes (#73)
* special tests for ConstantTadHelper/ConstantShapeHelper

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* release methods for data buffers

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* delete temporary buffer Java side

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* delete temporary buffer Java side

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2019-08-05 11:11:22 +10:00
Robert Altena ce9c372974 fix pad javadoc and @see links. (#72)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:11:22 +10:00
Alex Black 0d6bb657bc FlatBuffers dtype conversion fix (missing bfloat16) (#71)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 23:21:15 +10:00
Alex Black 06e4f5f96e Small DL4J/SameDiff fixes (#70)
* More mask fixes + remove debugging println

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small batch norm derivative fixe

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 23:19:09 +10:00
Alex Black 7939cf384b Misc fixes (#66)
* Small fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Flaky test fix

Signed-off-by: Alex Black <blacka101@gmail.com>
2019-07-20 23:17:03 +10:00
Alex Black d94bc7257c Various fixes (#65)
* #7977 deprecate legacy MultiLayerNetwork/ComputationGraph.params(boolean) method

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* Fix bad test

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* Small fixes

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* Fix Histogram mapping

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* Fix incorrect name handling in DifferentialFunction

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* More fixes

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* Histogram fixes

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* Proper histogram fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* ToString/NDArrayStrings fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* JSON UTF8 serialization fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 23:16:41 +10:00
raver119 c499dc962f - numpy import fix for CUDA (#64)
- skip tagLocation for empty arrays

Signed-off-by: raver119 <raver119@gmail.com>
2019-07-20 23:16:19 +10:00
raver119 c9e867b2e8 File existence validation for Nd4j.createFromNpyFile()
Signed-off-by: raver119 <raver119@gmail.com>
2019-07-20 23:15:57 +10:00
raver119 fd6c0df024 [WIP] More CUDA fixes/updates (#62)
* CUDA reallocation update

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* Legacy SoftMax/LogSoftMax/SoftMaxDerivative removed from cpp

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* SoftMaxDerivative op removed

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* few tests updates

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* RNG fixes

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* few more tests updates

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* legacy Histogram/Pooling2D removed

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* legacy Histogram removed

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* histogram moved

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* histogram moved cuda

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* Histogram custom op

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2019-07-20 23:07:42 +10:00
raver119 9cf28ea6c9 [WIP] CUDA tweaks (#60)
* special cpu concat

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* special concat fix

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* OpProfiler tweak for absent host pointers

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* minor test tweak to see orders

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* CUDA broadcasting diff orders fix

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* faster iterations

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* OldSoftMax/OldLogSoftMax gone

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* RandomLauncher tweaks

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* additional check int randomtests

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* skip prepare/register action for empty arrays

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* npz float16 fix

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* empty reduction cuda fixes

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* ShapeBufferTests tweaks

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2019-07-20 23:06:48 +10:00
raver119 6ce458e949 [WIP] CUDA Java side (#58)
* one crashing test

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* stupid issue fixed

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* one fix

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* dont ensure location for empty arrays

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* few more signatures fixed

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* few tweaks for DataBuffer creation from java primitives

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* get rid of legacy im2col/col2im intercept

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* rsubi scalar array fix

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2019-07-20 23:06:25 +10:00
raver119 c969b724bb [WIP] more CUDA stuff (#57)
* initial commit

Signed-off-by: raver119 <raver119@gmail.com>

* Added gradcheck test for dynamic_partition_bp op.

* - implementation of dilation op (cpu and cuda)

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed broadcast_dynamic_shape 1D case and tests.

* Fixed usage of default integer arguments.

* Fixed dynamic_partition_bp op and tests.

* Eliminated test with grad check for dynamic_partition_bp op.

* start working on cuda svd - porting available corresponding api from cuSOLVER library

Signed-off-by: Yurii <yurii@skymind.io>

* provide prelu_bp

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* - provide gruCell_bp (old version ??)

Signed-off-by: Yurii <yurii@skymind.io>

* - polishing cumsum_bp and cumprod_bp tests

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* provide sparseSoftmaxCrossEntropyWithLogits and sparseSoftmaxCrossEntropyWithLogits_grad

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed atomicMul with float input/output

* implementation of cuda kernel for triu_bp operation

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* Refactored lup helper to add parrallel computing.

* cusolver libraries

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* uncomment cuSolver APIs in svd.cu

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* cusolver var

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* - further work on cuSolver svd

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* Implement usage of cuda solver to LUP decomposition.

* - correct naames in lup functions

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* correct svdQR cuda

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* - provide transpositions of input matrices in case of c order in svdCudaQR

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed implementation issues with LUP usign cuda solver.

* Implementation of matrix_determinant helper with cuda kernels. Working revision.

* Implemented log_matrix_determinant helper with cuda kernels.

* - implementation of batched cuda svd

Signed-off-by: Yurii <yurii@skymind.io>

* Refactored cholesky helper and implementation of cuda solver cholesky batch.

* - implementation of cuda kernel for tile bp

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* Implementation of cholesky and logdet with cuda kernels.

* - implementation of cuda kernel for sru_bidirectional

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* Fixed cholesky helper.

* Cholesky op helper implementation. Working double-based cublas implementation.

* bad import excluded

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* Finished with cuda implementation of cholesky helper and tests.

* - implementation of cuda kernel for sru_bidirectional_backprop operation

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* Implementation of matrix_inverse op helper with cuda kernels. The first revision.

* - start working on gruCell_bp

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* Implementation of matrix_inverse helper.

* - further work on new gruCell_bp

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* cuBLAS related fixes

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* calculateOutputShapes() now passes device buffers as well

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* special concat/average/accumulate init host pointers now

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* few more tweaks

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* additional CudaDataBufferFactory signatures certain for data types

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* cuSolver host buffer

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* buffer to buffer memcpy host ptr allocation

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2019-07-20 23:05:21 +10:00
Alex Black cb6654bebb Add libnd4j benchmarks (#3)
This PR adds 2 libnd4j benchmarking suits
2019-07-20 22:54:44 +10:00
Ryan Nett 62c6a73f9d Include TF Import tests as forward pass tests in OpValidation (#53)
* ignore multinomial

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix for @NonNull varargs

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:24:11 +10:00
Ryan Nett daf3950d8d SameDiff If, While, and Misc changes (#52)
* softmax and logSoftmax w/ dimension

Signed-off-by: Ryan Nett <rnett@skymind.io>

* start of while

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* if, start of javadocs

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* while foreward pass working, backprop WIP

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* no backprop

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* Tensorflow style if/while (& tests), name scope fixes (and test), argument interceptor (for if/while), use '_' in op names instead of ':'

Signed-off-by: Ryan Nett <rnett@skymind.io>

* javadoc

Signed-off-by: Ryan Nett <rnett@skymind.io>

* many fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* many fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* Some fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* cleanup if condition doesn't return boolean

Signed-off-by: Ryan Nett <rnett@skymind.io>

* serialization fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use constants instead of magic numbers

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:23:40 +10:00
Ryan Nett 2d991f5445 LeakyReLU fix (#55)
* LeakyReLU: Use serScalar to set alpha correctly in TF import
LogX: remove incorrect TF mapping
Pow: remove TF import method (no mapping)
BaseOp: remove duplicate extraArgs

Signed-off-by: Ryan Nett <rnett@skymind.io>

* un-ignore cifar-10 gan, as it is now passing

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:23:19 +10:00
Ryan Nett 027d4d2a47 Add XLNet to zoo model ignores (#54)
* ignore xlnet

Signed-off-by: Ryan Nett <rnett@skymind.io>

* comment

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:22:57 +10:00
Ryan Nett d7c261ec40 added ability to run as test, and comments (#44)
Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:22:34 +10:00
raver119 5708fc087a [WIP] INDArray hashCode() impl (#50)
* initial commit

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* one more initial commit

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* parallel hashCode prototype

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* longBytes for hashCode

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* INDArray hashCode java side

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* few tests fixed for MSVC

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* Small gradcheck validation util fix - hash names not SDVariables

Signed-off-by: Alex Black <blacka101@gmail.com>

* Small fix + ignore for logged issue

Signed-off-by: Alex Black <blacka101@gmail.com>

* - scrollable iterator fix
- sptree hashset replaced with collection

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* hashcode exception removed

* int hashCode for java
2019-07-20 22:22:11 +10:00
Alex Black cc65c01118 Op validation improvements + encoding fix (#49)
* Op validation updates

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small logging fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7986 Fix minor character encoding issues

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small ignore fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 22:21:46 +10:00
Alex Black 88ea9a49eb TF optional properties resolution fix (#48)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 22:21:20 +10:00
Ryan Nett 4b23dc01fd fix for #7976, update test comment (to OOM) (#45)
Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:20:58 +10:00
raver119 15e7984392 Small fixes (#46)
* - fix for eclipse/#7959

* createFromNpy scalar fix

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* remove spam

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* rng custom ops tests

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* Numpy headers validation + tests

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* fix for scalar string flat serde

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* Where empty shape test

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2019-07-20 22:20:14 +10:00
Ryan Nett c135883162 [WIP] Ignored TF OP Import test updates (#37)
* new issue for b_d_s (old is closed), new issue for boolean_mask (old is fixed)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* date update

Signed-off-by: Ryan Nett <rnett@skymind.io>

* "embedding_lookup/.*multiple.*" is passing

Signed-off-by: Ryan Nett <rnett@skymind.io>

* new bincount issue (old was fixed)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* date update

Signed-off-by: Ryan Nett <rnett@skymind.io>

* where op comment

Signed-off-by: Ryan Nett <rnett@skymind.io>

* where passing

Signed-off-by: Ryan Nett <rnett@skymind.io>

* ignore gan

Signed-off-by: Ryan Nett <rnett@skymind.io>

* scatter_nd/rank2shape_2indices passing

Signed-off-by: Ryan Nett <rnett@skymind.io>

* topk update, test fix (need to verify)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* batch_to_space issue update

Signed-off-by: Ryan Nett <rnett@skymind.io>

* updates, no change

Signed-off-by: Ryan Nett <rnett@skymind.io>

* date updates

Signed-off-by: Ryan Nett <rnett@skymind.io>

* batch_to_space is fixed

Signed-off-by: Ryan Nett <rnett@skymind.io>

* equality function helper

Signed-off-by: Ryan Nett <rnett@skymind.io>

* topk passing

Signed-off-by: Ryan Nett <rnett@skymind.io>

* dropout equality check

Signed-off-by: Ryan Nett <rnett@skymind.io>

* adding ignores for zoo models

Signed-off-by: Ryan Nett <rnett@skymind.io>

* ignore libnd4j rnn tests

Signed-off-by: Ryan Nett <rnett@skymind.io>

* added batch to space test

Signed-off-by: Ryan Nett <rnett@skymind.io>

* issue comments

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:19:48 +10:00
raver119 dde50ee570 Small fixes (#43)
* minor cmake changes to make macos happy

* space_to_batch/batch_to_space validation fix

* - choose op tweaks
- tests updated to match appleid tweaks

Signed-off-by: raver119@gmail.com <raver119@gmail.com>

* - get rid of bad import

Signed-off-by: raver119@gmail.com <raver119@gmail.com>

* - choose now uses shape function
- choose test updated
2019-07-20 22:19:20 +10:00
Alex Black 8b4b8977a0 Batch Mmul v2 import fix (#41)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 22:18:52 +10:00
Ryan Nett d854e28b34 System info export for debugging and bug reporting (#34)
* System info export for debugging and bug reporting

Signed-off-by: Ryan Nett <rnett@skymind.io>

* class name fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* add version information, pointer memory info

Signed-off-by: Ryan Nett <rnett@skymind.io>

* add nvidia-smi and nvcc info

Signed-off-by: Ryan Nett <rnett@skymind.io>

* line cleanup

Signed-off-by: Ryan Nett <rnett@skymind.io>

* nvidia-smi run works

Signed-off-by: Ryan Nett <rnett@skymind.io>

* add oshi dependency

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use OS info, add workspaces info

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use ServiceLoader to load GPU information

Signed-off-by: Ryan Nett <rnett@skymind.io>

* register service

Signed-off-by: Ryan Nett <rnett@skymind.io>

* moved service out of NativeOpsHolder (private constructor)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* added newline

Signed-off-by: Ryan Nett <rnett@skymind.io>

* added license

Signed-off-by: Ryan Nett <rnett@skymind.io>

* and one more

Signed-off-by: Ryan Nett <rnett@skymind.io>

* copyright update

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* removed unused imports

Signed-off-by: Ryan Nett <rnett@skymind.io>

* removed more unused imports

Signed-off-by: Ryan Nett <rnett@skymind.io>

* close streams

Signed-off-by: Ryan Nett <rnett@skymind.io>

* and another one

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use method

Signed-off-by: Ryan Nett <rnett@skymind.io>

* one more copyright

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove double license

Signed-off-by: Ryan Nett <rnett@skymind.io>

* moved test to correct package

Signed-off-by: Ryan Nett <rnett@skymind.io>

* classpath update

Signed-off-by: Ryan Nett <rnett@skymind.io>

* classpath for java >8 fix

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:18:24 +10:00
Ryan Nett ef8cb55b7b Nd4j: Change array args to vararg and add toString options (#36)
* changed [] to ...

Signed-off-by: Ryan Nett <rnett@skymind.io>

* added randn(long seed, int... shape)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* Fixed a couple of methods

Signed-off-by: Ryan Nett <rnett@skymind.io>

* ToString methods w/ options

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fixes, less toString methods, and a few ops I missed

Signed-off-by: Ryan Nett <rnett@skymind.io>

* some javadocs, change int... to long... where possible

Signed-off-by: Ryan Nett <rnett@skymind.io>

* another javadoc

Signed-off-by: Ryan Nett <rnett@skymind.io>

* javadoc fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* just javadoc in INDArray

Signed-off-by: Ryan Nett <rnett@skymind.io>

* local/static fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* Add @NonNull to options

Signed-off-by: Ryan Nett <rnett@skymind.io>

* javadoc updates/fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more @NonNulls

Signed-off-by: Ryan Nett <rnett@skymind.io>

* even more @NonNulls, this time on varargs

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:16:13 +10:00
Ryan Nett 366d850f5e Add placeholder value for keras learning phase if required (#30)
* automatically add placeholders for keras_learning_phase if required

Signed-off-by: Ryan Nett <rnett@skymind.io>

* comment

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:03:31 +10:00
Ryan Nett cc6063402e added keepDims to INDArray methods (#33)
Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 21:58:06 +10:00
Robert Altena 0ef373fe45 Nd4j.java javadoc (#7997)
* up to line 500.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* up to line 1120.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

*  up to 1286.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* up to line 2400.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

*  up to line 2500.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* up to line 3600.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

*  up to line 4000.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* up to line 4500.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* up to line 5000.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* up to line 6000.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-07-20 12:05:46 +10:00
Alexandre Boulanger ee6aae268f RL4J refac: Added some observation transform classes (#7958)
* Added observation classes and tests

Signed-off-by: unknown <aboulang2002@yahoo.com>

* Now uses DataSetPreProcessors

Signed-off-by: Alexandre Boulanger <aboulang2002@yahoo.com>

* CompositeDataSetPreProcessor can now stop processing on empty dataset; Some DataSetPreProcessors moving from RL4J to ND4J

Signed-off-by: Alexandre Boulanger <aboulang2002@yahoo.com>

* Did requested minor changes

Signed-off-by: Alexandre Boulanger <Alexandre.Boulanger@ia.ca>
Signed-off-by: Alexandre Boulanger <aboulang2002@yahoo.com>
2019-07-20 10:28:20 +10:00
Samuel Audet deba1e0df9 Update dependencies to just released JavaCPP and JavaCV 1.5.1 (#8004)
Signed-off-by: Samuel Audet <samuel.audet@gmail.com>
2019-07-14 21:07:33 +03:00
Robert Altena 0c48e55f91 Remove duplicate code for append() and prepend() Fix #7983 (#7987)
* fix #7983

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* small fix.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* fix javadoc.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-07-09 13:58:50 +10:00
Robert Altena 595656d01e fix #7947 (#7985)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-07-08 16:35:21 +10:00
Alex Black 1170827c18 Merge master to upstream (#7945)
* Shugeo strided slice zeros (#14)

* Modified strided_slice op to properly work with empty-like shapes.

* Fixed test for reduce_mean with empty-like input.

* [WIP] Last merge (#15)

* correct logsoftmax looss (#2)

* Small SameDiff listener fix (#4)

* Various fixes (#6)

* #7839 Fix for asXMatrix and tests

* #7866 EmbeddingSequenceLayer dtype fix + test

* #7856 SameDiff save/load stream methods

* #7859 RegressionEvaluation rank 4 fix + tests + axis configuration

* EvaluationBinary 3d/4d

* More evaluation 3d/4d tests

* #7847 Evaluation empty checks

* Small test ifx

* #7848 Fix median edge case

* Improve DL4J samediff layer tests

* [WIP] FastText wrapper implemented (#8)

* FastText implemented

* Some fixes

* Fix shapes for wordsNearest

* Validation of input vectors

* Fixes

* Fixed test

* Thread tagged

* Some tweaks

* setContextClassLoader for DeallocatorServiceThread

* Numpy format tests (#1)

* Various fixes (#11)

* #7852 SameDiff gather fix

* #7892 SameDiff placeholder to constant conversion

* #7890 validate input rank for MLN/CG init methods

* Fix broken permute shape calculation

* Permute and gather fixes

* Tests

* #7850 LogSumExp fix + test

* Handful of test fixes

* Empty arrays with non-scalar shapes (#10)

* minor rearrangements for lambdas

* empty tensors with non-scalar shapes

* numpy empty tensors with non-scalar shapes

* few more empty tweaks

* Small fixes

* conv3d signature update

* micro fix in batchnorm mkldnn

* Import fixes

* Fix

* MKL-DNN update

* Small fill fix

* fill with empty input + test

* Fixes

* Small error improvement

* Fix

* one special test

* couple of fixes for lstm

* Rewrite TFGraphMapper.getNDArrayFromTensor to be maintainable and less error prone

* Fixes

* FP16

* Unsigned

* BFloat16

* Fill op - empty tweaks

* - couple of fixes for empty arrays construction
- stack updated

* strided slice fix

* one transform test

* provide method for reducing shapeInfo in case of input array is empty

* Fixed reduceAlongDimensions to use empty input properly.

* couple of broadcast tests

* couple of tests broadcast tests + tweak to make them pass

* add check of non-empty to methods producing sub-arrays

* Fixed reshapeC with zeros in shape.

* complete empty check in reduce_... legacy ops

* Concat and cumsum/prod

* Tweak to empty shape inference on import

* add empty check to the rest of reduce legacy ops

* one more test

* correct typo in evalReduceShapeInfoEmpty

* Added tests for reduce_* ops to tests with zero shapes.

* few more tests for empty reductions

* Fixed strided_slice op with empty case and tests.

* one more empty reduction test

* Fixed strided_slice test.

* add empty check to NDArray::reshapei

* infOrMax

* empty min/max with infinity tests

* made unstack working correctly with empty arrays

* few IndexReduce tests + tweaks for empty shapes

* add test for empty concat

* few tests fixed

* Validation fix for reductions on empty shapes

* Reverse fix

* Reduction shape calc fixes

* SameDiff.generateOutputVariable: don't use shape function to determine number of outputs

* Range fix

* - NDArray constructor updated for scalars/empty arrays
- few tests fixed

* More fixes

* Empty creator fixes

* concat fix

* concat fix

* TF import tests: allow 'both all NaN' and 'both all inf' to pass

* Slice, zero fraction, and reshape fixes

* transpose, gather

* Zero fraction

* scalar cast fix

* Empty reduction axis support

* few more tests fixed

* Fixed input checks conforming with TF for concat op and tests.

* few tests fixed

* matmul scalar shape fix

* Fixed checkout for data type and scalarity with concat to allow non-empty scalars with vector concats.

* broadcast bool fix

* few more tests

* few more tests

* correct evalReduceShapeInfoEmpty

* argmax/argmin + tests

* one more empty edge case + one more test

* argmax/argmin/realdiv_bp tweaks

* empty reshape test + fix

* Helper fixes

* Small fixes

* Gather test fix

* Gather test fix

* Small fixes

* reduce scalar zero values

* scalar mean workaround

* Remove debug code

* along dim mean workaround

* one more test

* - equalsTo() tweak for empty arrays
- one more test

* broadcast tweaks

* [WIP] Fixing outstanding issues for NLP (#9)

* Avoid using not-inited objects

* Test fixed.

* Redundant method avoided for models like FastText

* KMeans++ implementation

* KMeans++ implementation

* Disable parallel execution

* KMeans++

* Tests

* Dev branch merge (#16)

* SameDiff: convertDataType and gradient check util improvements (#12)

* GradCheck util improvements

* StopGradient constructor + test

* SameDiff: Add datatype conversion

* Javadoc and add DataType.isNumerical()

* Small fix

* Fix SameDiff TF import test cases intermediate naming (workaround for bad default)

* TFGraphTestAllHelper: check intermediates in execution order

* Add missing debug listener

* [WIP] lstmBlock fix + other changes (#13)

- fixes lstmBlock issue
- changes NDArray method reshape(), permute(), transpose() by making them return instance instead of pointer
- CheckNumerics op
- fixes for ReduceBool IsInfOrNan & IsFinite

* Small test fix

* CheckNumerics op wrapper

* Fix some issues on master (#17)

* Fix DataVec test issue

* Fix issue with dl4j SameDiff output layer

* Dtype fix for lambda layers

* #7912 BertIterator dtype fix (use float32 not global default)

* [WIP] Next set of CUDA stuff (#7)

New CUDA implementations and improvements

* bad file

* Dev branch master merge (#23)

* SameDiff: convertDataType and gradient check util improvements (#12)

* GradCheck util improvements

* StopGradient constructor + test

* SameDiff: Add datatype conversion

* Javadoc and add DataType.isNumerical()

* Small fix

* Fix SameDiff TF import test cases intermediate naming (workaround for bad default)

* TFGraphTestAllHelper: check intermediates in execution order

* Add missing debug listener

* [WIP] lstmBlock fix + other changes (#13)

- fixes lstmBlock issue
- changes NDArray method reshape(), permute(), transpose() by making them return instance instead of pointer
- CheckNumerics op
- fixes for ReduceBool IsInfOrNan & IsFinite

* Small test fix

* CheckNumerics op wrapper

* Compatibility of deserialization (#18)

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* SameDiff: add activation gradient checking support for debugging (#19)

* SameDiff gradient checker: first pass on activation gradient checks

* Fixes + tests for activation gradient checking

* Javadoc

* [WIP] Some nd4j data type corrections (#20)

* Adjust data type

* Set correct Data type.

* Size of proper data type.

* fix averaged cpu load (#22)

* SameDiff ops, TF import and fixes (#24)

* CheckNumerics tests + fixes + misc fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fake quant

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* FakeQuantWithMinMaxArgs

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* CheckNumerics fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix libnd4j ALL_INTS and ALL_FLOATS declaration (uint and bfloat types)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Javadoc

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Exception tweak

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix for out of scope stack allocated var use

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Ignores

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Ignore for known failing test (already logged issue)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Merge upstream to fork (#25)

* Add thousand-separator commas to TotalParams (#7915)

* Add thousand-separator commas to TotalParams

The number of parameters can be quite large, and it would help the reading of the summary printout to have the TotalParams column & values at the bottom have thousand-separator-commas in them.

* Add thousand-separator commas to MultiLayerNetwork

Corresponding change to MultiLayerNetwork

Signed-off-by: Jxtps Jxtps <jxtps435@gmail.com>

* Update contributing and issue/PR templates (#7934)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix link to AdaDelta paper (#7942)

Fix link to AdaDelta paper hosted on matthewzeiler.com

Signed-off-by: Jxtps

* Fixes, and ignores for known/logged failing issues (#7943)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* SameDiff + DL4J/SameDiff: Multiple fixes (#28)

* #7919 HDF5 attribute buffer length fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7909 Arbiter constructor exception ux improvements

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7925 RNN output layer length checks

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7939 Add listener for validating inputs are not incorrectly modified

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7939 Integrate NonInplaceValidationListener into tests

* #7844 DL4J SameDiff fixes for variable minibatch size

* DL4J SameDiff fixes - ensure gradient for input placeholder is available

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Tweaks to ExternalErrorsFunction - use placeholders, make more robust

* Another fix

* More fixes

* More SameDiff/DL4J fixes

* Scope out scalar array creation in BaseScalarOp

* Remove debug code

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* [WIP] Final dev branch merge (#29)

* SameDiff: convertDataType and gradient check util improvements (#12)

* GradCheck util improvements

* StopGradient constructor + test

* SameDiff: Add datatype conversion

* Javadoc and add DataType.isNumerical()

* Small fix

* Fix SameDiff TF import test cases intermediate naming (workaround for bad default)

* TFGraphTestAllHelper: check intermediates in execution order

* Add missing debug listener

* [WIP] lstmBlock fix + other changes (#13)

- fixes lstmBlock issue
- changes NDArray method reshape(), permute(), transpose() by making them return instance instead of pointer
- CheckNumerics op
- fixes for ReduceBool IsInfOrNan & IsFinite

* Small test fix

* CheckNumerics op wrapper

* Compatibility of deserialization (#18)

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* SameDiff: add activation gradient checking support for debugging (#19)

* SameDiff gradient checker: first pass on activation gradient checks

* Fixes + tests for activation gradient checking

* Javadoc

* [WIP] Some nd4j data type corrections (#20)

* Adjust data type

* Set correct Data type.

* Size of proper data type.

* fix averaged cpu load (#22)

* [WIP] Multiple dataset iterators (#27)

* Splitting dataset into arbitrary number

* Fixes

* Multiple split of iterator

* Test

* Test

* Some fixes

* signature change

* one more tweak

Signed-off-by: raver119 <raver119@gmail.com>

* one more test for sequential use of DataSetIteratorSplitter

Signed-off-by: raver119 <raver119@gmail.com>

* Fixes

* Fixes

* one more test for Alexander

Signed-off-by: raver119 <raver119@gmail.com>

* Some fixes

* Some fixes

* one more test for Alexander

Signed-off-by: raver119 <raver119@gmail.com>

* minor test fix

Signed-off-by: raver119 <raver119@gmail.com>

* Some fixes

* Some fixes

* couple of assertions tweaked

Signed-off-by: raver119 <raver119@gmail.com>

* MDS splitter test :/

Signed-off-by: raver119 <raver119@gmail.com>

* Minor refactoring

* Multi dataset

* Some fixes

* More tests

* Small number of test fixes/improvements (failures on CI) (#31)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* [WIP] More CUDA stuff (#26)

* initial commit

Signed-off-by: raver119 <raver119@gmail.com>

* LRN BP CUDA

Signed-off-by: raver119 <raver119@gmail.com>

* less memory

Signed-off-by: raver119 <raver119@gmail.com>

* Fixed bug with crop_and_resize op helper.

* get rid of unnecessary index-calculation dunction

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed sort with nth_element cuda-based helper.

* Refactored nth_element.

* Refactored nth_element op and tests.

* Modified usage of dim array with sortTad routine.

* Refactored main routine of helper for non_max_image_suppression op.

* non_max_image_suppression op helper with cuda kernel implementation. Initial revision.

* fix vol2col cuda kernel

* meh

Signed-off-by: raver119 <raver119@gmail.com>

* topK concept

Signed-off-by: raver119 <raver119@gmail.com>

* unsorted topK with scanWitdh of 1

Signed-off-by: raver119 <raver119@gmail.com>

* correct vol2col tests

* sorted/unsorted topK

Signed-off-by: raver119 <raver119@gmail.com>

* implementation and fixing col2im/col2vol

* Corrected usage flags with input/output with reverse op.

* dup is const now

Signed-off-by: raver119 <raver119@gmail.com>

* percentile op

Signed-off-by: raver119 <raver119@gmail.com>

* group tests for mapool2d

Signed-off-by: Yurii <yurii@skymind.io>

* special test for george

Signed-off-by: raver119 <raver119@gmail.com>

* less threads for sortTad

Signed-off-by: raver119 <raver119@gmail.com>

* provide conv2d for cuda

Signed-off-by: Yurii <yurii@skymind.io>

* remove auther in sort tad kernel code

Signed-off-by: Yurii <yurii@skymind.io>

* provide depthwise_conv2d for cuda

Signed-off-by: Yurii <yurii@skymind.io>

* - max_pooling_with_argmax
- null check for special use

Signed-off-by: raver119 <raver119@gmail.com>

* dts cuda

Signed-off-by: raver119 <raver119@gmail.com>

* provide sconv2d for cuda

Signed-off-by: Yurii <yurii@skymind.io>

* std cuda

Signed-off-by: raver119 <raver119@gmail.com>

* Refactored non_max_suppression op to conform TF implementation.

* Improved suppression helper.

* provide pooling3d for cuda

Signed-off-by: Yurii <yurii@skymind.io>

* minor lstm rearrangements

Signed-off-by: raver119 <raver119@gmail.com>

* more of minor lstm rearrangements

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* (bi)dynamic_rnn

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* templates init order

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* Refactored non_max_suppression op.

* Added cuda kernel for non_max_suppression.

* CPU sort by key/value

Signed-off-by: raver119 <raver119@gmail.com>

* CPU sort TAD by key/value

Signed-off-by: raver119 <raver119@gmail.com>

* CPU sort TAD by key/value tests

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* Eliminate compiler error with cuda implementation.

* - repaired gradCheck in cuda
- provide conv2d_bp for cuda

Signed-off-by: Yurii <yurii@skymind.io>

* missed signature

Signed-off-by: raver119 <raver119@gmail.com>

* provide depthwise_conv2d_bp for cuda

Signed-off-by: Yurii <yurii@skymind.io>

* Implementation of lup helper with cuda kernel. Initial commit.

* further work on backprops for convolutions

Signed-off-by: Yurii <yurii@skymind.io>

* CUDA linear sort by key/val

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* CUDA tad sort by key/val

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* start providing of backprop for pooling2d/3d

Signed-off-by: Yurii <yurii@skymind.io>

* Added atomicAdd for bool datatype.

* dynamic partition concept

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* dynamic partition concept

Signed-off-by: raver119 <raver119@gmail.com>

* dynamic partition scalar CUDA

Signed-off-by: raver119 <raver119@gmail.com>

* important comment

Signed-off-by: raver119 <raver119@gmail.com>

* fix pooling2d/3d backprop helpers

Signed-off-by: Yurii <yurii@skymind.io>

* Added non-linear test with dynamic_partition.

* Improved test for dynamic_partition.

* dynamic_partition TAD concept

Signed-off-by: raver119 <raver119@gmail.com>

* - dynamic_partition TAD CUDA impl
- dynamic_partition TAD CPU fix

Signed-off-by: raver119 <raver119@gmail.com>

* - rewrite cpu code for usampling2d/3d
- write cuda code for usampling2d/3d

Signed-off-by: Yurii <yurii@skymind.io>

* dynamic_stitch CUDA vector case

Signed-off-by: raver119 <raver119@gmail.com>

* dynamic_stitch CUDA TAD case concept

Signed-off-by: raver119 <raver119@gmail.com>

* dynamic_stitch CUDA TAD case impl

Signed-off-by: raver119 <raver119@gmail.com>

* Added tests for dynamic_stitch 3D-4D cases.

* minor tests tweaks

Signed-off-by: raver119 <raver119@gmail.com>

* Fixed type check for dynamic stitch.

* min/max bp

Signed-off-by: raver119 <raver119@gmail.com>

* rewrite code for upsampling2d/3d cpu

Signed-off-by: Yurii <yurii@skymind.io>

* reduce min/max/norm_max bp

Signed-off-by: raver119 <raver119@gmail.com>

* lup implementation. Additional enhancements.

* provide code for upsamling2d/3d backprop

Signed-off-by: Yurii <yurii@skymind.io>

* weightedCrossEntropyWithLogits

Signed-off-by: raver119 <raver119@gmail.com>

* Fixed template math atomicMul for 64bit ints.

* Refactored dynamic_partition_bp op.

* inverseBroadcast fix

Signed-off-by: raver119 <raver119@gmail.com>

* DynamicPartitionBP test datatype fixed.

* - nd4j_atomicMul Windows fix
- cpu/NDArrayLambda.hpp excluded from CUDA

Signed-off-by: raver119 <raver119@gmail.com>
2019-06-27 18:37:04 +03:00
Alex Black cae4fc9760
Fixes, and ignores for known/logged failing issues (#7943)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-06-25 12:07:28 +10:00
jxtps e2db385682 Fix link to AdaDelta paper (#7942)
Fix link to AdaDelta paper hosted on matthewzeiler.com

Signed-off-by: Jxtps
2019-06-25 10:50:17 +10:00
Alex Black 68ea5f3688
Dev branch merge: dev_20190606 (#7904)
* correct logsoftmax looss (#2)

* Small SameDiff listener fix (#4)

* Various fixes (#6)

* #7839 Fix for asXMatrix and tests

* #7866 EmbeddingSequenceLayer dtype fix + test

* #7856 SameDiff save/load stream methods

* #7859 RegressionEvaluation rank 4 fix + tests + axis configuration

* EvaluationBinary 3d/4d

* More evaluation 3d/4d tests

* #7847 Evaluation empty checks

* Small test ifx

* #7848 Fix median edge case

* Improve DL4J samediff layer tests

* [WIP] FastText wrapper implemented (#8)

* FastText implemented

* Some fixes

* Fix shapes for wordsNearest

* Validation of input vectors

* Fixes

* Fixed test

* Thread tagged

* Some tweaks

* setContextClassLoader for DeallocatorServiceThread

* Numpy format tests (#1)

* Various fixes (#11)

* #7852 SameDiff gather fix

* #7892 SameDiff placeholder to constant conversion

* #7890 validate input rank for MLN/CG init methods

* Fix broken permute shape calculation

* Permute and gather fixes

* Tests

* #7850 LogSumExp fix + test

* Handful of test fixes

* Empty arrays with non-scalar shapes (#10)

* minor rearrangements for lambdas

* empty tensors with non-scalar shapes

* numpy empty tensors with non-scalar shapes

* few more empty tweaks

* Small fixes

* conv3d signature update

* micro fix in batchnorm mkldnn

* Import fixes

* Fix

* MKL-DNN update

* Small fill fix

* fill with empty input + test

* Fixes

* Small error improvement

* Fix

* one special test

* couple of fixes for lstm

* Rewrite TFGraphMapper.getNDArrayFromTensor to be maintainable and less error prone

* Fixes

* FP16

* Unsigned

* BFloat16

* Fill op - empty tweaks

* - couple of fixes for empty arrays construction
- stack updated

* strided slice fix

* one transform test

* provide method for reducing shapeInfo in case of input array is empty

* Fixed reduceAlongDimensions to use empty input properly.

* couple of broadcast tests

* couple of tests broadcast tests + tweak to make them pass

* add check of non-empty to methods producing sub-arrays

* Fixed reshapeC with zeros in shape.

* complete empty check in reduce_... legacy ops

* Concat and cumsum/prod

* Tweak to empty shape inference on import

* add empty check to the rest of reduce legacy ops

* one more test

* correct typo in evalReduceShapeInfoEmpty

* Added tests for reduce_* ops to tests with zero shapes.

* few more tests for empty reductions

* Fixed strided_slice op with empty case and tests.

* one more empty reduction test

* Fixed strided_slice test.

* add empty check to NDArray::reshapei

* infOrMax

* empty min/max with infinity tests

* made unstack working correctly with empty arrays

* few IndexReduce tests + tweaks for empty shapes

* add test for empty concat

* few tests fixed

* Validation fix for reductions on empty shapes

* Reverse fix

* Reduction shape calc fixes

* SameDiff.generateOutputVariable: don't use shape function to determine number of outputs

* Range fix

* - NDArray constructor updated for scalars/empty arrays
- few tests fixed

* More fixes

* Empty creator fixes

* concat fix

* concat fix

* TF import tests: allow 'both all NaN' and 'both all inf' to pass

* Slice, zero fraction, and reshape fixes

* transpose, gather

* Zero fraction

* scalar cast fix

* Empty reduction axis support

* few more tests fixed

* Fixed input checks conforming with TF for concat op and tests.

* few tests fixed

* matmul scalar shape fix

* Fixed checkout for data type and scalarity with concat to allow non-empty scalars with vector concats.

* broadcast bool fix

* few more tests

* few more tests

* correct evalReduceShapeInfoEmpty

* argmax/argmin + tests

* one more empty edge case + one more test

* argmax/argmin/realdiv_bp tweaks

* empty reshape test + fix

* Helper fixes

* Small fixes

* Gather test fix

* Gather test fix

* Small fixes

* reduce scalar zero values

* scalar mean workaround

* Remove debug code

* along dim mean workaround

* one more test

* - equalsTo() tweak for empty arrays
- one more test

* broadcast tweaks
2019-06-15 21:34:34 +10:00
Alex Black 32e5cc1945
First round of runtime test improvements (#7875)
* Capsnet test runtime improvements

* Slow test speedups

* Next round of test speed improvements

* More test improvements

* Improve test speed

* Next round of test speedups

* Another round

* More test speedups

* Another round

* Another round of test speedups

* Another round of speedups...

* CuDNN test speedups + more tests extending BaseDL4JTest

* Minor fix + more BaseDL4JTest use in other modules
2019-06-13 20:40:40 +10:00
skymindops b5f0ec072f Eclipse Migration Initial Commit 2019-06-06 15:21:15 +03:00