Commit Graph

13 Commits (e88325640042796274d88f0596abcff4dba285e8)

Author SHA1 Message Date
raver119 320924278d
Legacy API changes (#441)
* initial commit

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* another initial commit

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* another initial commit

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* one more initial commit

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* next step

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* next step

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* next step

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* next step

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* Refactored buffer() and shapeInfo() methods usage with NDArray class.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt Graph class methods to use const shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt choose op to use constant shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt where op shape method to use constant shapes.

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* Adopt lstsq op to use constant empty shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt matrix_diag_part op shape routine to use constant shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt determinant ops to use constant shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt mean_pairwssqerr_loss ops to use constant shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt ops shape methods.

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* Adopt shape methods for loss ops.

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* Adopt log_loss op shape method.

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* Adopt shape methods for ops.

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* Adopt dilation2d ops shape methods.

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* Adopted deconv2d ops shape methods.

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* Adopted dynamicRNN op shape method.

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* Adopted shape methods for ops.

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* Adopted shape methods for lstm layer ops.

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* few updates

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* first cuda tweak

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* Adopt constant shapes for sconv2d ops.

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* Adopt constant shapes for gru ops.

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* Adopt constant shapes with shape methods for segment ops and so on.

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* Adopted constant shapes with unsorted_segment_* ops.

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* Adopted constant shapes with gamma op shape method.

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* Adopted shape methods of reduce_stddev ops.

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* Adopted shape methods for reduce_* ops.

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* Adopt shape method for squeeze op.

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* Adopt strided_slice shape method.

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* Refactored concat op shape method to adopt constant shapes.

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* Adopted shape method for mirror_pad op.

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* Adopted split op shape method.

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* Adopted tile ops shape methods.

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* Added const cast for mkldnn routines handles.

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* Refactored logSoftMaxForVector_ routine to conform with proper data and shape pointer casts.

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* Cosmetic changes to proper usage of constant pointers.

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* Refactored a couple shape comparators for strides and addBias helpers to proper use data pointers with inplace option.

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* Refactored depthToSpace helpers.

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* Refactored histogram helpers.

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* Refactored im2col helpers.

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* Refactored gather and gatherND helpers.

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* Fixed buffer usage on percentile helper.

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* Fixed gather shape with helpers and range buffer usage.

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* Fixed buffer usage with space to depth helpers.

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* Fixed buffer usage and constant shapes.

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* Fixed buffer usage with LUP decomposition>

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* Refactored onehot_ helper.

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* Refactored pad and prefix to use constant shapes.

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* Refactoed softmax helpers.

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* Fixed space to batch helpers to use buffers properly.

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* Fixed stack and split helpers.

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* Fixed buffer usage with sparse to dense helpers.

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* Fixed buffer usage with mindistance_ helpers.

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* Fixed buffer usage with tile helper.

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* Fixed constant shape usage.

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* Fixed constant shape usage with legacy pairwise bool ops.

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* Refactored a couple of methods to adopt constant shape usage.

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* Fixed broadcasting with constant shape."

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* Fixed const usage with inplace reverse and constant shapes with legacy reduction.

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* Refactored legacy ops with const shapes.

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* Refactored sort to adopt constant shapes.

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* Corrected sort for constant shape usage.

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* Fixed constant shape usage with special methods.

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* Refactored Context to conform with constant shape usage.

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* CUDA broadcasting headers

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* pairwise/indexreduce/random headers

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* Refactored native ops to adopt constant shapes.

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* legacy reduce3/scalar headers

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* Corrected pullRow signature and tests.

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* Corrected routines to proper use of constant shapes.

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* Refactored tests to use constant shapes properly.

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* Refactored legacy ops tests to use constant shapes properly.

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* Refactored buffer usage with NDArray tests.

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* Fixed native ops tests.

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* Fixed special concat routine.

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* Fixed buffer usage with test.

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* Fixed buffer usage with a test.

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* Refactored TAD.h and tests.

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* Refactored calcStrides* routines to use constant shapes.

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* Fixed miscelaneous errors with constant shapes.

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* NativeOps const changes

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* Corrected definitions for declared functions.

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* NativeOps const changes

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* few more const changes

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* Fixed const shapes with shape routines.

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* few more const changes

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* Fixed shape method for broadcastable case.

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* few more const changes

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* xw_plus_b BP shape fn restored

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* Fixed signatures with broadcasting.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Repaired backprops shape methods for a set of operations.

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* Refactored broadcast bool for cuda.

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* Refactored methods for 3 args with const qualifier.

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* Fixed a couple of kernel signatures for broadcasting.

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* Fixed kernels signatures for const buffers and shapes.

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* Refactored pairwise methods to persistent buffers and shapes usage.

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* Adopt const to buffers and shapes with kernels.

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* Adopt const to buffers and shapes with scalar kernels.

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* Refactored indexreduce kernels signatures to use const buffers and shapes.

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* Refactored pairwise kernels to adopt cons shapes and buffers.

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* Refactored pairwise bool kernels to adopt cons shapes and buffers.

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* Refactored random special ops to conform with const shapes and buffers.

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* Refactored native ops to conform with const shapes and buffers under cuda platform.

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* Cosmetical changes only.

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* Fixed const shapes and buffers error.

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* Corrected start pos routine.

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* Refactored methods to conform with const shapes and buffers.

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* Refactored helpers to use proper methods instead.

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* bunch of changes

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* next bunch of changes

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* next bunch of changes

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* Fixed execScalar declaration.

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* Fixed execScalar declaration.

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* Corrected const shape cases with sort and so on.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Fixed const shapes for sort.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Refactored kernel declarations to adopt const shapes.

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* Fixed kernels declarations to adopt const shapes.

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* Corrected kernel declarations to adopt const shapes and buffers.

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* Fixed kernels declarations to adopt const shapes.

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* Fixed segment helpers kernels declarations and so on to adopt const shapes.

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* Fixed const shape usage with segment and solve helpers.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Fixed kernel declaration with adjustWeight helper.

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* Fixed cuda implementations for constant shape helpers.

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* Adopted const shape usage with kernels.

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* Adopted top_k kernels to use const shapes and buffers.

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* Corrected kernels declarations to adopt const shapes with helpers.

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* Refactored NDArray definitions to adopt const shapes and buffers.

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* Fixed const shapes with image suppression helpers.

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* Slight improvement with buffers.

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* Refactored buffer usage.

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* Refactored buffer usage with tests.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Fixed const shape usage with definitions.

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* minor updates on cpu side

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* Refactored const shape usage with ConstantDescritor and native ops with cuda platform.

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* Refactored tear and tile kernels to adopt with const shapes.

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* softmax_loop fix

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* update missing signature

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* softmax again

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* few more missing consts

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* new methods updated

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Co-authored-by: shugeo <sgazeos@gmail.com>
2020-05-09 08:06:14 +03:00
Andrii T 5fbb04531d
At cpp ops (#378)
* crelu op added

* crelu op added

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* minor fixes

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* crelu(bp)+transformOpValidation op

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* added ClipByAvgNorm and DepthwiseConv2DBp

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* ClipByAvgNorm passes forward check

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* EmbeddingLookup draft

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* DepthwiseConv2DB gradient check

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* EmbeddingLookup and DepthwiseConv2dBp finished + tests added

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* ImageResize draft

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* DepthwiseConv2DB gradient check

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* ImageResize passed tests except helper::resizeFunctor:Non implemented

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* replaced ImageResizeMethods enum by codegen

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* minor fixes

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* polished checkpoint (OPValidationSuite passed and mvn install build succesfull after codegen)

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* manually merged LSTMLayerTestCases from master
Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* MaximumBp added and tested

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* MergeAddBp draft

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* MergeMaxBp and MergeAvgBP added and tests passed

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* minor fix

* draft LSTMLayerBp (big relative layer in gradient check)

* LSTMLayerBp check

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* LSTMLayerBp check v2

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* requested changes (test passes)

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* LSTMLayer testcases passed gradientcheck

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* small LSTMLayer testcase1 improvement (cLast, yLast)

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* Warnings issue solved

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* Fixes for MKLDNN LSTM layer helper

Signed-off-by: Alex Black <blacka101@gmail.com>

* stable version

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

Co-authored-by: raver119 <raver119@gmail.com>
Co-authored-by: Alex Black <blacka101@gmail.com>
2020-04-17 15:16:14 +10:00
Andrii T d86dd5b131
DL4J and SameDiff integration tests + LSTMLayer java op class (#353)
* init in this branch

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* Lenetet Mnist workflow

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* small fix for calculations

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* for Alex to check placeholder null pointer issue

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* CNN3D workflow

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* state for launching on dxg to regenterate dl4j examples

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* SD RNN test case workflow

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* small fixes

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* checkpoint at lstmBlock: Input array 1 (x) rank must be got input with rank 2 issue

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* Fix LSTMLayer inputs order

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* lstm mismatch with c++ op issue

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* LSTMLayer config draft

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* LSTMLayer config draft v2

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* have doubt I had to do this

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* NDRNN generated by codegen

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* LSTMLayerTestCases draft

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* minor fixes again

* added LSTMLayer testcases to nd4j-tests + setted Preconditions in LSTMLayer constructors

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* added lost SDCNNtestcases

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* overrided getNumOutputs from DynamicCustomOp in LSTMLayer and reorganized LSTMLayerOutputs according to cpp op

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* finished with LSTMLayerOutputs

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* Fix MKLDNN platform checks (i.e., when MKLDNN can be used vs. not)

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix LSTMLayerWeights input order

Signed-off-by: Alex Black <blacka101@gmail.com>

* More fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* minor fixes

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* fixed LSTMLayer testcases

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* finished SameDiffRNNTestCase

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* finished all testcases + minor fixes

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* Multiple generation-related fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix multiple issues

Signed-off-by: Alex Black <blacka101@gmail.com>

* More fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* LSTM fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Regenerate ND4J namespaces and fix multiple issues

Signed-off-by: Alex Black <blacka101@gmail.com>

* changed SameDiffRNNTestCase

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* Small fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* added  Nd4j.getRandom().setSeed(12345) where needed

Signed-off-by: Andrii Tuzhykov <andrewtuzhykov@gmail.com>

* #8828 Fix ND4J profiler NaN/Inf checks when using OpContext

Signed-off-by: Alex Black <blacka101@gmail.com>

* #8828 Fix ND4J profiler NaN/Inf checks when using OpContext

Signed-off-by: Alex Black <blacka101@gmail.com>

* Tweak to weight init for SameDiff CNN test case

Signed-off-by: Alex Black <blacka101@gmail.com>

* Tweaks for test cases

Signed-off-by: Alex Black <blacka101@gmail.com>

* Ignore failing tests until fixed

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* Fix

Signed-off-by: Alex Black <blacka101@gmail.com>

Co-authored-by: Alex Black <blacka101@gmail.com>
2020-04-09 00:20:48 +10:00
Yurii Shyrma e700b59f80
Shyrma weights format (#329)
* - start to introduce additional weights formats into conv2d ops

Signed-off-by: Yurii <iuriish@yahoo.com>

* - provide weights format variety in backprop conv2d and deconv2d ops, testing and fixing bugs

Signed-off-by: Yurii <iuriish@yahoo.com>

* - forgot to recover kernels sizes in deconv2d_bp test

Signed-off-by: Yurii <iuriish@yahoo.com>

* - built in weights format in depthwise conv 2d op

Signed-off-by: Yurii <iuriish@yahoo.com>

* - provide new weights formats in mkl dnn conv ops

Signed-off-by: Yurii <iuriish@yahoo.com>

* - provide new weights formats in cuda conv helpers

Signed-off-by: Yurii <iuriish@yahoo.com>

* - working with new weights format in cudnn conv api

Signed-off-by: Yurii <iuriish@yahoo.com>

* - take into account order of arrays in cudnn tensor descriptions

Signed-off-by: Yurii <iuriish@yahoo.com>

* - provide new weights formats in cpu conv3d (ff/bp)

Signed-off-by: Yurii <iuriish@yahoo.com>

* - provide new weights formats in cpu deconv3d (ff/bp)

Signed-off-by: Yurii <iuriish@yahoo.com>

* - provide new weights formats in conv3d ops (ff/bp) based on mkl api

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* - provide new weights formats in conv3d ops (ff/bp) based on cudnn api

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* - resolve conflicts 2

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Co-authored-by: raver119 <raver119@gmail.com>
2020-03-20 12:11:27 +03:00
Oleh 41bde8f885
Softmax BP mkldnn implementation (#301)
* libnd4j mkldnn softmax_bp operation implementation and integration, 2 tests added, need some refactoring and code clean up and more testing with different input shapes

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* libnd4j softmax_bp update, code refactoring, etc

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* libnd4j merge master, fixed typos, minor tweaks, code clean up

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* libnd4j  integrate mkldnnUtils helpers in other mkldnn operations

Signed-off-by: Oleg <oleg.semeniv@gmail.com>
2020-03-12 18:25:29 +03:00
raver119 63fa3c2ef3
libnd4j polishing (#273)
* initial set of include changes

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* one more tweak

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* few more rearrangements

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* few more rearrangements

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* few more rearrangements

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* cuda includes rearrangements

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* java update

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* = namespace changed to sd
- few CMake variables renamed with SD_ prefix

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* java update

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* LoopKind minor fix

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* few more changes

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* few more changes

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* few more changes

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* sanitizer is optional now

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* dev tests updated

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* few more changes

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* last update

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* java update

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2020-03-02 12:49:41 +03:00
Yurii Shyrma fe47f52896
Oleh tenzor mmul (#231)
* Libnd4j: TensorMMul backprop op #8174, raw implementation

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 merge master and some corrections

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 algorithm update, need testing, sync with  master

* Libnd4j: TensorMMul backprop op #8174 fixed incorrect B axes calculation

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 optimize axes identification and fix bug of indeces overlapping, added first test. need testing with different shapes

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 some fixes and improvements need more testing

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 fixed order of matrix multiply

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* Libnd4j: TensorMMul backprop op #8174 fixed issue of incorrect axes definition, add tests based on TF, need additional testing for case dLdC not equal 1

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 fixed scalar case add test

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* Libnd4j: TensorMMul backprop op #8174 fixed bp algorithm, axes definition, need some mode testing with different orders combination f,c; c,f f,f and add some checks for inputs

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 some checks and corrections added tests, exists the problem with different input orders support A-f B-c and A-f B-f

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 sync master

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* - correct bug in MmulHelper::tensorDot(a, b, c, axes_a, axes_b,permutForC)

Signed-off-by: Yurii <iuriish@yahoo.com>

* Libnd4j: TensorMMul backprop op #8174 code clean up and refactoring

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* - add check for linspase ordered permutations in ShapeUtils::evalShapeForTensorDot

Signed-off-by: Yurii <iuriish@yahoo.com>

* - provide additional code in shape::reshape stuff in order to reduce amount of allocation/copy operations during reshaping procedure

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* - further work on problem of wrong shape evaluation during permute/reshape procedures

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* - still looking for bug reason in reshape/permute stuff

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* - correct bug in transform cuda native ops

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* - correct bug in NDArray::assign

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* - remove old shape::reshape stuff

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* - add possibility to disable copy of old buffer to new buffer during reshape operation in NDArray class

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* - correct bug in tensorDot which had to do with wrong pointers assigments

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Co-authored-by: Oleh <oleg.semeniv@gmail.com>
2020-02-13 20:33:54 +03:00
raver119 7783012f39
cuDNN integration (#150)
* initial commit

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* one file

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* few more includes

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* m?

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* const

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* cudnn linkage in tests

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* culibos

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* static reminder

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* platform engine tag

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* HAVE_CUDNN moved to config.h.in

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* include

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* include

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* skip cudnn handle creation if there's not cudnn

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* meh

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* target device in context

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* platform engines

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* platform engines

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* allow multiple -h args

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* allow multiple -h args

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* move mkldnn out of CPU block

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* link to mkldnn on cuda

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* less prints

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* minor tweaks

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* next step

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* conv2d NCHW draft

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* conv2d biasAdd

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* test for MKL/CUDNN combined use

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* - provide additional code for conv2d ff based on cudnn api, not tested yet

Signed-off-by: Yurii <iuriish@yahoo.com>

* - further work on conv2d helper based on using cudnn api

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* - fixing several cuda bugs which appeared after cudnn lib had been started to use

Signed-off-by: Yurii <iuriish@yahoo.com>

* - implementation of conv2d backprop op based on cudnn api

Signed-off-by: Yurii <iuriish@yahoo.com>

* - implementaion of conv3d and conv3d_bp ops based on cudnn api

Signed-off-by: Yurii <iuriish@yahoo.com>

* - bugs fixing in conv3d/conv3d_bp ops (cudnn in use)

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* - implementation of depthwiseConv2d (ff/bp) op based on cudnn api

Signed-off-by: Yurii <iuriish@yahoo.com>

* - implementation of batchnorm ff op based on cudnn api

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* - disable cudnn batchnorm temporary

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* - add minor change in cmake

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* engine for depthwise mkldnn

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* couple of includes

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* - provide permutation to cudnn batchnorm ff when format is NHWC

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* lgamma fix

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* - eliminate memory leak in two tests

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Co-authored-by: Yurii Shyrma <iuriish@yahoo.com>
2020-01-20 21:32:46 +03:00
raver119 cb18d3d996
allow MKL-DNN on non-AVX machines (#104)
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2019-12-04 09:11:37 +03:00
raver119 59e955cedc
- MKL-DNN version upgrade to 1.1.x (#62)
- MKL-DNN namespace changes to match DNNL rename

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2019-11-20 13:23:08 +03:00
Yurii Shyrma 0cdb5750e0
Shyrma concat (#24)
* - provide possibility to pass axis as last input array in concat op
- corrcect sumation in bias_add_bp op for NHWC case

Signed-off-by: Yurii <iuriish@yahoo.com>

* - write code for deconv2d op based on mkl dnn api

* no unsafe math

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* no unsafe math

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* - get rid of e<> and p<> methods in svd helper

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* - provide mkl api support for deconvolution 3d

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* - write deconv2d_bp based on mkl api

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* - write deconv3d_bp based on mkl api

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* - testing and fixing deconv based on mkl api

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* - remove dilation form conv2d/3d mkl

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* - minor changes

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* - further corrections of deconv ops based on mkl dnn api

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* - provide deconv2d_tf based on mkl dnn api

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* - add minor corrections required by reviewer

Signed-off-by: Yurii <iuriish@yahoo.com>
2019-11-03 12:37:19 +02:00
Yurii Shyrma 029a69a835
Shyrma bn mkl bp (#14)
* - write code for new batchnorm backprop

Signed-off-by: Yurii <iuriish@yahoo.com>

* - testing batchnorm backprop

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* - write code for batchnorm backprop based on mkl dnn api

Signed-off-by: Yurii <iuriish@yahoo.com>

* - testing and fixing bugs in batchnorm_bp mkl dnn

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* - made corrections required by reviewer

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* - change name in java wrapper for batchnorm op

Signed-off-by: Yurii <iuriish@yahoo.com>
2019-10-26 14:14:21 +03:00
Yurii 70bd925abd - write 2 versions of new lstmLayer: one is based on own code, second uses mkl dnn api 2019-10-17 20:44:52 +03:00