Commit Graph

68 Commits (c78f5a8225d6a883b58e529577d22773fe7e310f)

Author SHA1 Message Date
Robert Altena f8615e0ef0
nd4j refactoring. (#103)
Restored writeTxt per slack DM.
2019-08-07 19:31:48 +09:00
Alex Black edb71bf46f
Add SameDiff exec debugging listener + few fixes (#104)
* First pass on SameDiff op exec debug listener

Signed-off-by: Alex Black <blacka101@gmail.com>

* #7555 DL4J helpers - don't fall back on builtin for op profiler exceptions

Signed-off-by: Alex Black <blacka101@gmail.com>

* Exec debugging listener + fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix import counts for TF ops in OpValidationSuite

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix bad DL4J test configuration

Signed-off-by: Alex Black <blacka101@gmail.com>

* Exec debugging listener polish

Signed-off-by: Alex Black <blacka101@gmail.com>

* Small fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* Another fix

Signed-off-by: Alex Black <blacka101@gmail.com>
2019-08-07 17:18:29 +10:00
Robert Altena ba1d1b160b
remove method with unused parameter. (#102)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-06 19:14:45 +09:00
Robert Altena a438434b1f
Nd4j refactoring (#101)
* cleanup

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-06 16:40:08 +09:00
Alex Black b8846113bd
Small number of fixes + cleanup + some missing op methods + constructors (#100)
* Remove unused op class - DefaultOpConverter

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Add SDImage class; INDArray constructor additions

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Floordiv

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small polish to image methods

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small DataVec test fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 22:31:46 +10:00
Alex Black 923ab15583 Small number of fixes (#98)
* Remove no longer functioning LegacyPooling2D class

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8066 First steps for reflection scanning - INDArray constructors

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small build fix for ND4S

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More nd4s fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:28:07 +10:00
raver119 aefdbc17d6 exclude two methods for JNI
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-05 11:27:05 +10:00
raver119 e2b7675e9c build fix
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-05 11:27:05 +10:00
raver119 e565788329 cuda build fix for issues introduced by recent refactoring
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-05 11:27:05 +10:00
Robert Altena dfec54242d createUninitializedDetached refactoring. (#94)
* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* createUninitializedDetached refactored.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:27:05 +10:00
Alex Black cd41c3540d #8038 Fix Op profiler NaN/Inf triggering + add tests (#93)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:25:48 +10:00
Alex Black e18e2dc014 Various ND4J/DL4J fixes (#90)
* Deprecate Old*Op instances

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8063 #8054 Broadcast exceptions + cleanup inplace ops

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Remove bad test condition

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7993 Fix shape function issue in crop_and_resize op

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J SameDiff lambda layer fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8029 Fix for pnorm backprop math

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:25:48 +10:00
Robert Altena fbe120031d remove createSparse methods. (#92)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:25:48 +10:00
Robert Altena 386a9f057b remove create method with unused parameter. (#89)
* remove create method with unused parameter.

* removed more unused methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* removing more unused code.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* last removal of unused code.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:25:48 +10:00
raver119 065b34c7cb [WIP] Numpy boolean import (#91)
* numpy bool type

Signed-off-by: raver119 <raver119@gmail.com>

* numpy bool java side

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2019-08-05 11:25:48 +10:00
Alex Black b95417f7c5 Various ND4J/DL4J fixes and improvements (#87)
* Reshape and reallocate - small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Reshape and reallocate - small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #6488 ElementWiseVertex broadcast support

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Constructors and broadcast supported it Transforms.max/min

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8054 ElementWiseVertex now supports broadcast inputs

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8057 Nd4j.create overload dtype fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7551 ND4J Shape validation fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:24:20 +10:00
Robert Altena aa4af2c36d refactor duplicate code from pad methods. (#86)
* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:24:20 +10:00
Ryan Nett d4e7997134 SameDiff Convolution Config validation, better output methods (#82)
* Conv Config validation & tests

Signed-off-by: Ryan Nett <rnett@skymind.io>

* stackOutputs utility method

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use constructor for validation, support negative kernel sizes (infered from weights)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* better output methods

Signed-off-by: Ryan Nett <rnett@skymind.io>

* move output to be with fit and evaluate

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-08-05 11:24:20 +10:00
Samuel Audet 8d1fe8b1b3 Fix functions of OpaqueVariablesSet 2019-08-05 11:24:20 +10:00
Robert Altena fa98b83295 remove duplicate code in createBufferDetached. (#83)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:22:59 +10:00
Samuel Audet 526b782e51 Create C wrappers for some of the C++ classes currently used by ND4J 2019-08-05 11:22:59 +10:00
Samuel Audet 8881bfe7aa Adapt the Java wrappers in ND4J generated with JavaCPP 2019-08-05 11:22:59 +10:00
Alex Black fad8da878f Various DL4J/ND4J fixes (#81)
* #7954 Force refresh of UI when switching tabs on overview page

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8017 Concurrent modification exception (synchronize) fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8033 Don't initialize updater in middle of writing memory crash dump

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8208 Fix shape checks for ND4J int[] creator methods

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #6385 #7992 Keras import naming fixes + cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8016 Upsampling3D - add NDHWC format support

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-08-05 11:21:23 +10:00
Robert Altena 70dbe70594 fix javadoc. (#76)
* fix javadoc.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace most @see with @link s.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:21:23 +10:00
Ryan Nett ac321265a7 SameDiff fixes and naming (#78)
* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching
2019-08-05 11:21:23 +10:00
Ryan Nett 00e6296140 Zoo model TF import test updates (#75)
* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers
2019-08-05 11:13:41 +10:00
raver119 b9708be5db delete temporary TadPack C++/Java side (#74)
Signed-off-by: raver119 <raver119@gmail.com>
2019-08-05 11:11:22 +10:00
raver119 59a006ce29 [WIP] More fixes (#73)
* special tests for ConstantTadHelper/ConstantShapeHelper

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* release methods for data buffers

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* delete temporary buffer Java side

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* delete temporary buffer Java side

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2019-08-05 11:11:22 +10:00
Robert Altena ce9c372974 fix pad javadoc and @see links. (#72)
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
2019-08-05 11:11:22 +10:00
Alex Black 0d6bb657bc FlatBuffers dtype conversion fix (missing bfloat16) (#71)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 23:21:15 +10:00
Alex Black 06e4f5f96e Small DL4J/SameDiff fixes (#70)
* More mask fixes + remove debugging println

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small batch norm derivative fixe

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 23:19:09 +10:00
Alex Black 7939cf384b Misc fixes (#66)
* Small fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Flaky test fix

Signed-off-by: Alex Black <blacka101@gmail.com>
2019-07-20 23:17:03 +10:00
Alex Black d94bc7257c Various fixes (#65)
* #7977 deprecate legacy MultiLayerNetwork/ComputationGraph.params(boolean) method

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix bad test

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix Histogram mapping

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix incorrect name handling in DifferentialFunction

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Histogram fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Proper histogram fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* ToString/NDArrayStrings fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* JSON UTF8 serialization fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 23:16:41 +10:00
raver119 c499dc962f - numpy import fix for CUDA (#64)
- skip tagLocation for empty arrays

Signed-off-by: raver119 <raver119@gmail.com>
2019-07-20 23:16:19 +10:00
raver119 c9e867b2e8 File existence validation for Nd4j.createFromNpyFile()
Signed-off-by: raver119 <raver119@gmail.com>
2019-07-20 23:15:57 +10:00
raver119 fd6c0df024 [WIP] More CUDA fixes/updates (#62)
* CUDA reallocation update

Signed-off-by: raver119 <raver119@gmail.com>

* Legacy SoftMax/LogSoftMax/SoftMaxDerivative removed from cpp

Signed-off-by: raver119 <raver119@gmail.com>

* SoftMaxDerivative op removed

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* few tests updates

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* RNG fixes

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* few more tests updates

Signed-off-by: raver119 <raver119@gmail.com>

* legacy Histogram/Pooling2D removed

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* legacy Histogram removed

Signed-off-by: raver119 <raver119@gmail.com>

* histogram moved

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* histogram moved cuda

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* Histogram custom op

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2019-07-20 23:07:42 +10:00
raver119 9cf28ea6c9 [WIP] CUDA tweaks (#60)
* special cpu concat

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* special concat fix

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* OpProfiler tweak for absent host pointers

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* minor test tweak to see orders

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* CUDA broadcasting diff orders fix

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* faster iterations

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* OldSoftMax/OldLogSoftMax gone

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* RandomLauncher tweaks

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* additional check int randomtests

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* skip prepare/register action for empty arrays

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* npz float16 fix

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* empty reduction cuda fixes

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* ShapeBufferTests tweaks

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2019-07-20 23:06:48 +10:00
raver119 6ce458e949 [WIP] CUDA Java side (#58)
* one crashing test

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* stupid issue fixed

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* one fix

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* dont ensure location for empty arrays

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* few more signatures fixed

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* few tweaks for DataBuffer creation from java primitives

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* get rid of legacy im2col/col2im intercept

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* rsubi scalar array fix

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2019-07-20 23:06:25 +10:00
raver119 c969b724bb [WIP] more CUDA stuff (#57)
* initial commit

Signed-off-by: raver119 <raver119@gmail.com>

* Added gradcheck test for dynamic_partition_bp op.

* - implementation of dilation op (cpu and cuda)

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed broadcast_dynamic_shape 1D case and tests.

* Fixed usage of default integer arguments.

* Fixed dynamic_partition_bp op and tests.

* Eliminated test with grad check for dynamic_partition_bp op.

* start working on cuda svd - porting available corresponding api from cuSOLVER library

Signed-off-by: Yurii <yurii@skymind.io>

* provide prelu_bp

Signed-off-by: Yurii <yurii@skymind.io>

* - provide gruCell_bp (old version ??)

Signed-off-by: Yurii <yurii@skymind.io>

* - polishing cumsum_bp and cumprod_bp tests

Signed-off-by: Yurii <yurii@skymind.io>

* provide sparseSoftmaxCrossEntropyWithLogits and sparseSoftmaxCrossEntropyWithLogits_grad

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed atomicMul with float input/output

* implementation of cuda kernel for triu_bp operation

Signed-off-by: Yurii <yurii@skymind.io>

* Refactored lup helper to add parrallel computing.

* cusolver libraries

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* uncomment cuSolver APIs in svd.cu

Signed-off-by: Yurii <yurii@skymind.io>

* cusolver var

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* - further work on cuSolver svd

Signed-off-by: Yurii <yurii@skymind.io>

* Implement usage of cuda solver to LUP decomposition.

* - correct naames in lup functions

Signed-off-by: Yurii <yurii@skymind.io>

* correct svdQR cuda

Signed-off-by: Yurii <yurii@skymind.io>

* - provide transpositions of input matrices in case of c order in svdCudaQR

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed implementation issues with LUP usign cuda solver.

* Implementation of matrix_determinant helper with cuda kernels. Working revision.

* Implemented log_matrix_determinant helper with cuda kernels.

* - implementation of batched cuda svd

Signed-off-by: Yurii <yurii@skymind.io>

* Refactored cholesky helper and implementation of cuda solver cholesky batch.

* - implementation of cuda kernel for tile bp

Signed-off-by: Yurii <yurii@skymind.io>

* Implementation of cholesky and logdet with cuda kernels.

* - implementation of cuda kernel for sru_bidirectional

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed cholesky helper.

* Cholesky op helper implementation. Working double-based cublas implementation.

* bad import excluded

Signed-off-by: raver119 <raver119@gmail.com>

* Finished with cuda implementation of cholesky helper and tests.

* - implementation of cuda kernel for sru_bidirectional_backprop operation

Signed-off-by: Yurii <yurii@skymind.io>

* Implementation of matrix_inverse op helper with cuda kernels. The first revision.

* - start working on gruCell_bp

Signed-off-by: Yurii <yurii@skymind.io>

* Implementation of matrix_inverse helper.

* - further work on new gruCell_bp

Signed-off-by: Yurii <yurii@skymind.io>

* cuBLAS related fixes

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* calculateOutputShapes() now passes device buffers as well

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* special concat/average/accumulate init host pointers now

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* few more tweaks

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* additional CudaDataBufferFactory signatures certain for data types

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* cuSolver host buffer

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* buffer to buffer memcpy host ptr allocation

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2019-07-20 23:05:21 +10:00
Alex Black cb6654bebb Add libnd4j benchmarks (#3)
This PR adds 2 libnd4j benchmarking suits
2019-07-20 22:54:44 +10:00
Ryan Nett 62c6a73f9d Include TF Import tests as forward pass tests in OpValidation (#53)
* ignore multinomial

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix for @NonNull varargs

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:24:11 +10:00
Ryan Nett daf3950d8d SameDiff If, While, and Misc changes (#52)
* softmax and logSoftmax w/ dimension

Signed-off-by: Ryan Nett <rnett@skymind.io>

* start of while

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* if, start of javadocs

Signed-off-by: Ryan Nett <rnett@skymind.io>

* while foreward pass working, backprop WIP

Signed-off-by: Ryan Nett <rnett@skymind.io>

* no backprop

Signed-off-by: Ryan Nett <rnett@skymind.io>

* Tensorflow style if/while (& tests), name scope fixes (and test), argument interceptor (for if/while), use '_' in op names instead of ':'

Signed-off-by: Ryan Nett <rnett@skymind.io>

* javadoc

Signed-off-by: Ryan Nett <rnett@skymind.io>

* many fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* many fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* Some fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* cleanup if condition doesn't return boolean

Signed-off-by: Ryan Nett <rnett@skymind.io>

* serialization fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use constants instead of magic numbers

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:23:40 +10:00
Ryan Nett 2d991f5445 LeakyReLU fix (#55)
* LeakyReLU: Use serScalar to set alpha correctly in TF import
LogX: remove incorrect TF mapping
Pow: remove TF import method (no mapping)
BaseOp: remove duplicate extraArgs

Signed-off-by: Ryan Nett <rnett@skymind.io>

* un-ignore cifar-10 gan, as it is now passing

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:23:19 +10:00
Ryan Nett 027d4d2a47 Add XLNet to zoo model ignores (#54)
* ignore xlnet

Signed-off-by: Ryan Nett <rnett@skymind.io>

* comment

Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:22:57 +10:00
Ryan Nett d7c261ec40 added ability to run as test, and comments (#44)
Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:22:34 +10:00
raver119 5708fc087a [WIP] INDArray hashCode() impl (#50)
* initial commit

Signed-off-by: raver119@gmail.com <raver119@gmail.com>

* one more initial commit

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* parallel hashCode prototype

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* longBytes for hashCode

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* INDArray hashCode java side

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* few tests fixed for MSVC

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* Small gradcheck validation util fix - hash names not SDVariables

Signed-off-by: Alex Black <blacka101@gmail.com>

* Small fix + ignore for logged issue

Signed-off-by: Alex Black <blacka101@gmail.com>

* - scrollable iterator fix
- sptree hashset replaced with collection

Signed-off-by: raver119 <raver119@gmail.com>

* hashcode exception removed

* int hashCode for java
2019-07-20 22:22:11 +10:00
Alex Black cc65c01118 Op validation improvements + encoding fix (#49)
* Op validation updates

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small logging fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #7986 Fix minor character encoding issues

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small ignore fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 22:21:46 +10:00
Alex Black 88ea9a49eb TF optional properties resolution fix (#48)
Signed-off-by: AlexDBlack <blacka101@gmail.com>
2019-07-20 22:21:20 +10:00
Ryan Nett 4b23dc01fd fix for #7976, update test comment (to OOM) (#45)
Signed-off-by: Ryan Nett <rnett@skymind.io>
2019-07-20 22:20:58 +10:00
raver119 15e7984392 Small fixes (#46)
* - fix for eclipse/#7959

* createFromNpy scalar fix

Signed-off-by: raver119 <raver119@gmail.com>

* remove spam

Signed-off-by: raver119 <raver119@gmail.com>

* rng custom ops tests

Signed-off-by: raver119 <raver119@gmail.com>

* Numpy headers validation + tests

Signed-off-by: raver119 <raver119@gmail.com>

* fix for scalar string flat serde

Signed-off-by: raver119 <raver119@gmail.com>

* Where empty shape test

Signed-off-by: raver119 <raver119@gmail.com>
2019-07-20 22:20:14 +10:00