Commit Graph

30 Commits (94c7dbc462b7d2a3d0d9fcd5ece5059f0bc0029b)

Author SHA1 Message Date
AbdelRauf 1550cebcd5 reshape: fix optional order case that failed tests
Signed-off-by: AbdelRauf <rauf@konduit.ai>
2021-02-23 21:20:29 +01:00
agibsonccc 04209693f5 Update reshape.cpp 2021-02-05 22:57:57 +09:00
agibsonccc b2fabb0585 Fix reshape and other unit tests 2021-02-05 22:35:41 +09:00
agibsonccc 6dc7e2f08f Update c++ copyrights 2021-02-01 21:31:45 +09:00
agibsonccc 65c6a9a42e Dev commits 2021-02-01 14:31:20 +09:00
raver119 ac7fb903d7
C++ rearrangements (#485)
* initial commit

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* some minor singleton changes

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* more iterations

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* more singletons updated

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* more singletons updated

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* more changes

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* CUDA updates

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* Java side update

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* one commented out test

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2020-06-06 15:26:55 +03:00
raver119 320924278d
Legacy API changes (#441)
* initial commit

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* another initial commit

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* another initial commit

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* one more initial commit

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* next step

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* next step

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* next step

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* next step

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* Refactored buffer() and shapeInfo() methods usage with NDArray class.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt Graph class methods to use const shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt choose op to use constant shapes.

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* Adopt where op shape method to use constant shapes.

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* Adopt lstsq op to use constant empty shapes.

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* Adopt matrix_diag_part op shape routine to use constant shapes.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Adopt determinant ops to use constant shapes.

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* Adopt mean_pairwssqerr_loss ops to use constant shapes.

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* Adopt ops shape methods.

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* Adopt shape methods for loss ops.

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* Adopt log_loss op shape method.

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* Adopt shape methods for ops.

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* Adopt dilation2d ops shape methods.

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* Adopted deconv2d ops shape methods.

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* Adopted dynamicRNN op shape method.

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* Adopted shape methods for ops.

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* Adopted shape methods for lstm layer ops.

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* few updates

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* first cuda tweak

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* Adopt constant shapes for sconv2d ops.

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* Adopt constant shapes for gru ops.

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* Adopt constant shapes with shape methods for segment ops and so on.

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* Adopted constant shapes with unsorted_segment_* ops.

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* Adopted constant shapes with gamma op shape method.

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* Adopted shape methods of reduce_stddev ops.

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* Adopted shape methods for reduce_* ops.

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* Adopt shape method for squeeze op.

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* Adopt strided_slice shape method.

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* Refactored concat op shape method to adopt constant shapes.

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* Adopted shape method for mirror_pad op.

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* Adopted split op shape method.

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* Adopted tile ops shape methods.

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* Added const cast for mkldnn routines handles.

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* Refactored logSoftMaxForVector_ routine to conform with proper data and shape pointer casts.

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* Cosmetic changes to proper usage of constant pointers.

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* Refactored a couple shape comparators for strides and addBias helpers to proper use data pointers with inplace option.

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* Refactored depthToSpace helpers.

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* Refactored histogram helpers.

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* Refactored im2col helpers.

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* Refactored gather and gatherND helpers.

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* Fixed buffer usage on percentile helper.

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* Fixed gather shape with helpers and range buffer usage.

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* Fixed buffer usage with space to depth helpers.

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* Fixed buffer usage and constant shapes.

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* Fixed buffer usage with LUP decomposition>

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* Refactored onehot_ helper.

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* Refactored pad and prefix to use constant shapes.

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* Refactoed softmax helpers.

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* Fixed space to batch helpers to use buffers properly.

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* Fixed stack and split helpers.

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* Fixed buffer usage with sparse to dense helpers.

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* Fixed buffer usage with mindistance_ helpers.

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* Fixed buffer usage with tile helper.

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* Fixed constant shape usage.

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* Fixed constant shape usage with legacy pairwise bool ops.

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* Refactored a couple of methods to adopt constant shape usage.

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* Fixed broadcasting with constant shape."

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* Fixed const usage with inplace reverse and constant shapes with legacy reduction.

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* Refactored legacy ops with const shapes.

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* Refactored sort to adopt constant shapes.

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* Corrected sort for constant shape usage.

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* Fixed constant shape usage with special methods.

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* Refactored Context to conform with constant shape usage.

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* CUDA broadcasting headers

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* pairwise/indexreduce/random headers

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* Refactored native ops to adopt constant shapes.

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* legacy reduce3/scalar headers

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* Corrected pullRow signature and tests.

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* Corrected routines to proper use of constant shapes.

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* Refactored tests to use constant shapes properly.

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* Refactored legacy ops tests to use constant shapes properly.

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* Refactored buffer usage with NDArray tests.

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* Fixed native ops tests.

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* Fixed special concat routine.

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* Fixed buffer usage with test.

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* Fixed buffer usage with a test.

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* Refactored TAD.h and tests.

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* Refactored calcStrides* routines to use constant shapes.

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* Fixed miscelaneous errors with constant shapes.

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* NativeOps const changes

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* Corrected definitions for declared functions.

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* NativeOps const changes

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* few more const changes

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* Fixed const shapes with shape routines.

Signed-off-by: shugeo <sgazeos@gmail.com>

* few more const changes

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* Fixed shape method for broadcastable case.

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* few more const changes

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* xw_plus_b BP shape fn restored

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* Fixed signatures with broadcasting.

Signed-off-by: shugeo <sgazeos@gmail.com>

* Repaired backprops shape methods for a set of operations.

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* Refactored broadcast bool for cuda.

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* Refactored methods for 3 args with const qualifier.

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* Fixed a couple of kernel signatures for broadcasting.

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* Fixed kernels signatures for const buffers and shapes.

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* Refactored pairwise methods to persistent buffers and shapes usage.

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* Adopt const to buffers and shapes with kernels.

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* Adopt const to buffers and shapes with scalar kernels.

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* Refactored indexreduce kernels signatures to use const buffers and shapes.

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* Refactored pairwise kernels to adopt cons shapes and buffers.

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* Refactored pairwise bool kernels to adopt cons shapes and buffers.

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* Refactored random special ops to conform with const shapes and buffers.

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* Refactored native ops to conform with const shapes and buffers under cuda platform.

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* Cosmetical changes only.

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* Fixed const shapes and buffers error.

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* Corrected start pos routine.

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* Refactored methods to conform with const shapes and buffers.

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* Refactored helpers to use proper methods instead.

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* bunch of changes

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* next bunch of changes

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* next bunch of changes

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* Fixed execScalar declaration.

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* Fixed execScalar declaration.

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* Corrected const shape cases with sort and so on.

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* Fixed const shapes for sort.

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* Refactored kernel declarations to adopt const shapes.

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* Fixed kernels declarations to adopt const shapes.

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* Corrected kernel declarations to adopt const shapes and buffers.

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* Fixed kernels declarations to adopt const shapes.

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* Fixed segment helpers kernels declarations and so on to adopt const shapes.

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* Fixed const shape usage with segment and solve helpers.

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* Fixed kernel declaration with adjustWeight helper.

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* Fixed cuda implementations for constant shape helpers.

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* Adopted const shape usage with kernels.

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* Adopted top_k kernels to use const shapes and buffers.

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* Corrected kernels declarations to adopt const shapes with helpers.

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* Refactored NDArray definitions to adopt const shapes and buffers.

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* Fixed const shapes with image suppression helpers.

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* Slight improvement with buffers.

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* Refactored buffer usage.

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* Refactored buffer usage with tests.

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* Fixed const shape usage with definitions.

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* minor updates on cpu side

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* Refactored const shape usage with ConstantDescritor and native ops with cuda platform.

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* Refactored tear and tile kernels to adopt with const shapes.

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* softmax_loop fix

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* update missing signature

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* softmax again

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* few more missing consts

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* new methods updated

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Co-authored-by: shugeo <sgazeos@gmail.com>
2020-05-09 08:06:14 +03:00
Yurii Shyrma 48102c61d0
- correct reshape op for empty shapes (#354)
* - correct reshape op for empty shape in case of -1 at the end

Signed-off-by: Yurii <iuriish@yahoo.com>

* Fix test + new reshape op constructor

Signed-off-by: Alex Black <blacka101@gmail.com>

Co-authored-by: Alex Black <blacka101@gmail.com>
2020-04-01 15:13:34 +11:00
Yurii Shyrma 29e61579c1
Shyrma reshape empty (#338)
* - start working on reshape op which operates with empty shapes

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* - correct reshaping for empty arrays

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* - remove unnecessary check in Loopkind

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2020-03-31 07:41:16 +03:00
raver119 226f0672bc size op fixed
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2020-03-23 17:02:03 +03:00
raver119 1f3e4c18e1
some structure for ops (#337)
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2020-03-23 07:28:54 +03:00
raver119 63fa3c2ef3
libnd4j polishing (#273)
* initial set of include changes

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* one more tweak

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* few more rearrangements

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* few more rearrangements

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* few more rearrangements

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* cuda includes rearrangements

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* java update

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* = namespace changed to sd
- few CMake variables renamed with SD_ prefix

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* java update

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* LoopKind minor fix

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* few more changes

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* few more changes

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* few more changes

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* sanitizer is optional now

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* dev tests updated

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* few more changes

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* last update

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* java update

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2020-03-02 12:49:41 +03:00
raver119 5c806d2fb5
reshape tweak (#275)
* - expand dims tweak
- reshape memcpy

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* validation fix

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2020-02-26 14:05:32 +03:00
Yurii Shyrma 011c272fde
Shyrma transpose (#244)
* - provide contiguous strides for ouput in transpose op

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* - provide contiguous strides for output in permute op

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* - take into account empty shapes properly in transpose/permute op

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2020-02-17 08:04:28 +03:00
raver119 9e3c1b02b1
Perf improvements (#242)
* initial commit

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* meh

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* better ExpandDims impl

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* better Squeeze impl

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* better Softmax impl

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* one test disabled

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* more accurate impl

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* - GraphProfiler now prints full shapeInfo instead of shape
- softmax typo fix

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2020-02-14 16:20:31 +03:00
raver119 3de3cd8277
R119 tests (#238)
* one small test

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* one small test

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* bert test

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* Graph FlowPath fix

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* - GraphProfiler tweaks
- NodeProfile now includes shapes

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* RELU_layer inplace tweak

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* meh

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* identity tweaks

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* bert result validation

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* - bunch of Shape ops have inplace exec forbidden now
- Legacy ops have inplace exec disabled by default now

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* ffast-math enabled

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* ffast-math enabled

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* allow some legacy ops to be inplace

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* disable -fast_math

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* disable expensive test for cuda

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2020-02-13 20:59:35 +03:00
Yurii Shyrma fe47f52896
Oleh tenzor mmul (#231)
* Libnd4j: TensorMMul backprop op #8174, raw implementation

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 merge master and some corrections

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 algorithm update, need testing, sync with  master

* Libnd4j: TensorMMul backprop op #8174 fixed incorrect B axes calculation

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 optimize axes identification and fix bug of indeces overlapping, added first test. need testing with different shapes

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 some fixes and improvements need more testing

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 fixed order of matrix multiply

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 fixed issue of incorrect axes definition, add tests based on TF, need additional testing for case dLdC not equal 1

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 fixed scalar case add test

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* Libnd4j: TensorMMul backprop op #8174 fixed bp algorithm, axes definition, need some mode testing with different orders combination f,c; c,f f,f and add some checks for inputs

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* Libnd4j: TensorMMul backprop op #8174 some checks and corrections added tests, exists the problem with different input orders support A-f B-c and A-f B-f

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* Libnd4j: TensorMMul backprop op #8174 sync master

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* - correct bug in MmulHelper::tensorDot(a, b, c, axes_a, axes_b,permutForC)

Signed-off-by: Yurii <iuriish@yahoo.com>

* Libnd4j: TensorMMul backprop op #8174 code clean up and refactoring

Signed-off-by: Oleg <oleg.semeniv@gmail.com>

* - add check for linspase ordered permutations in ShapeUtils::evalShapeForTensorDot

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* - provide additional code in shape::reshape stuff in order to reduce amount of allocation/copy operations during reshaping procedure

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* - further work on problem of wrong shape evaluation during permute/reshape procedures

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* - still looking for bug reason in reshape/permute stuff

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* - correct bug in transform cuda native ops

Signed-off-by: Yurii <iuriish@yahoo.com>

* - correct bug in NDArray::assign

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* - remove old shape::reshape stuff

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* - add possibility to disable copy of old buffer to new buffer during reshape operation in NDArray class

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* - correct bug in tensorDot which had to do with wrong pointers assigments

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Co-authored-by: Oleh <oleg.semeniv@gmail.com>
2020-02-13 20:33:54 +03:00
raver119 ba961c7601
DataTypes & FlatBuffers (#197)
* flatbuffers version upgrade

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* flatbuffers version upgrade java side

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* flatbuffers dependency version upgrade java side

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* MKLDNN version upgrade

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* DArgs first pass

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* signatures first pass

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* signatures second pass

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* signatures third pass

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* signatures third pass

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* signatures fourth pass

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* signatures fifth pass

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* flatbuffers UI version upgrade java side

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* flatbuffers ui update

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* flatbuffers downgrade

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* flatbuffers downgrade java side

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2020-01-30 10:07:24 +03:00
raver119 62f93ac211
negative handling for empty arrays (#146)
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2019-12-24 13:23:25 +03:00
Yurii Shyrma 5d9b2a16e5 Shyrma temp (#131)
* - specifying template instantiation for certain types in float16 and bloat16

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* - polishing bfloat16 and float16 member functions template specialization

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* - rewrite and overload array +-*/ scalar and scalar +-*/ arr in NDAray class

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* - make corrections which have to do with and rvalue lvalue conversions

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* - provide move semantic in NDArray operators array +-/* array

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* float16/bfloat16 tweaks

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* one more tweak

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* - make float16 and bfloat16 to compile successfully on cuda

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* - do not use resources of view-like arrays when move semantics is applied

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* - get rid of pointers in signatures NDArray methods 1

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* - correction of signature of NDArray::dup method

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* - correction of signature of NDArray::reduceAlongDimension method

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* - signature correction of NDArray::applyIndexReduce and applyTrueBroadcast methods

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* - signature correction of NDArray::applyReduce3 and varianceAlongDimension methods

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* - signature correction of NDArray::tensorsAlongDimension and diagonal methods

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* - signature correction of NDArray::allTensorsAlongDimension

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* - signature correction of NDArray::reduceAlongDimension 2

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* - signature correction of NDArray::applyTransform 2

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* - signature correction of NDArray::applyPairwiseTransform 2

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* - signature correction of NDArray::applyBroadcast 2

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* - signature correction of NDArray::applyTrueBroadcast 2

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* - signature correction of NDArray::applyScalar and applyScalarArr

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* - signature correction of NDArray::lambda methods

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* - signature correction of NDArray::reduce3 methods 2

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* - signature correction of following NDArray methods: add/sub/mul/div row/column and fillAsTriangular

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* - signature correction of NDArray::tileToShape methods

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* - signature correction of NDArray::isShapeSameStrict method

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* minor corrections in tests

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* - replace reduce op in batchnorm mkldnn

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* - add explicit templates instantiations for operator+(NDArray&&. const scalar)

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* - corrections of casts in float16/bfloat16

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* - provide move semantics in following NDArray methods: transform, applyTrueBroadcast, transpose, reshape, permute

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* - get rid of input array A duplicate in svd cuda op

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* - avoid available bug in svd cuda API

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* - add temporary global memory buffer in svd cuda when calcUV = false and  m != n

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* - remove test with blfoat16 type for betainC

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* - resolve conflicts after master has been merged in

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* - changed type of affected input array in fused_batch_norm

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* - add several explicit type castings

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* - add ND4J_EXPORT to operators

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* - add explicit template types in instantiations of template arithm operators of NDArray class

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* - one more test fix

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Co-authored-by: raver119 <raver119@gmail.com>
2019-12-20 22:35:39 +03:00
raver119 70e08c3a6c reshape validation fix
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2019-12-06 21:19:33 +03:00
raver119 25b3cd9b80
[WIP] CUDA tests (#95)
* one more CI test

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* export additional symbols

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* few more tweaks

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* one more tweak for linux

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* fix dtype in few tests

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* missing sync and memset in couple of tests

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* copy step for libnd4j cuda

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* no-op on empty for adjust hue/contrast/saturation

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* CUDA_VERBOSE Off

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* BroadcastBool fix + few tests

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* trigger jenkins

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* trigger jenkins

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* - ignore couple of warnings
- remove redundant compiler options

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2019-12-02 21:37:21 +03:00
shugeo 4187190609 Shugeo release fix2 (#70)
* Corrected input checking and tests for bitcast op.

* Fixed an issue with non_max_suppression form generation and processing with score threshold given.

* Fixed bilinear resize kernel and tests.

* push for Serhii

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* Added test for nearest_neighbor resize with int input.

* Added data type check for input/output match.

* Eliminate error in macros.

* Improved output message for type checking.

* Fixed input/output types for op.

* Eliminated waste logging.

* Refactored resize_bilinear helper for multithreading for cpu platform.

* Cosmetic changes only.

* Fixed error for string substitution.

* Skip test for cbow_batch with cuda.

* fix for resizeNearestNeighbor output dtype

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* Refactored non_max_suppression helper.

* Refactored shape generation and input handling.

* Added additional test.
2019-11-22 22:42:44 +03:00
raver119 83cb0d9329
[WIP] Create and small fix (#67)
* - create op
- skip exec for empty inputs for non_max_suppression
- EmptyHandling idea

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* Create op and mapping for it

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2019-11-21 13:31:20 +03:00
raver119 729dc5e879
[WIP] size etc (#155)
* one test for size

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* - few tests for size op
- size/rank/size_at ops now use p instead of assign

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2019-08-23 12:31:12 +03:00
raver119 f49c4ea9d0
int -> long (#108)
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2019-08-10 09:14:18 +03:00
raver119 7c5c84bea8 4 additional tests
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2019-08-05 11:21:23 +10:00
Alex Black 1170827c18 Merge master to upstream (#7945)
* Shugeo strided slice zeros (#14)

* Modified strided_slice op to properly work with empty-like shapes.

* Fixed test for reduce_mean with empty-like input.

* [WIP] Last merge (#15)

* correct logsoftmax looss (#2)

* Small SameDiff listener fix (#4)

* Various fixes (#6)

* #7839 Fix for asXMatrix and tests

* #7866 EmbeddingSequenceLayer dtype fix + test

* #7856 SameDiff save/load stream methods

* #7859 RegressionEvaluation rank 4 fix + tests + axis configuration

* EvaluationBinary 3d/4d

* More evaluation 3d/4d tests

* #7847 Evaluation empty checks

* Small test ifx

* #7848 Fix median edge case

* Improve DL4J samediff layer tests

* [WIP] FastText wrapper implemented (#8)

* FastText implemented

* Some fixes

* Fix shapes for wordsNearest

* Validation of input vectors

* Fixes

* Fixed test

* Thread tagged

* Some tweaks

* setContextClassLoader for DeallocatorServiceThread

* Numpy format tests (#1)

* Various fixes (#11)

* #7852 SameDiff gather fix

* #7892 SameDiff placeholder to constant conversion

* #7890 validate input rank for MLN/CG init methods

* Fix broken permute shape calculation

* Permute and gather fixes

* Tests

* #7850 LogSumExp fix + test

* Handful of test fixes

* Empty arrays with non-scalar shapes (#10)

* minor rearrangements for lambdas

* empty tensors with non-scalar shapes

* numpy empty tensors with non-scalar shapes

* few more empty tweaks

* Small fixes

* conv3d signature update

* micro fix in batchnorm mkldnn

* Import fixes

* Fix

* MKL-DNN update

* Small fill fix

* fill with empty input + test

* Fixes

* Small error improvement

* Fix

* one special test

* couple of fixes for lstm

* Rewrite TFGraphMapper.getNDArrayFromTensor to be maintainable and less error prone

* Fixes

* FP16

* Unsigned

* BFloat16

* Fill op - empty tweaks

* - couple of fixes for empty arrays construction
- stack updated

* strided slice fix

* one transform test

* provide method for reducing shapeInfo in case of input array is empty

* Fixed reduceAlongDimensions to use empty input properly.

* couple of broadcast tests

* couple of tests broadcast tests + tweak to make them pass

* add check of non-empty to methods producing sub-arrays

* Fixed reshapeC with zeros in shape.

* complete empty check in reduce_... legacy ops

* Concat and cumsum/prod

* Tweak to empty shape inference on import

* add empty check to the rest of reduce legacy ops

* one more test

* correct typo in evalReduceShapeInfoEmpty

* Added tests for reduce_* ops to tests with zero shapes.

* few more tests for empty reductions

* Fixed strided_slice op with empty case and tests.

* one more empty reduction test

* Fixed strided_slice test.

* add empty check to NDArray::reshapei

* infOrMax

* empty min/max with infinity tests

* made unstack working correctly with empty arrays

* few IndexReduce tests + tweaks for empty shapes

* add test for empty concat

* few tests fixed

* Validation fix for reductions on empty shapes

* Reverse fix

* Reduction shape calc fixes

* SameDiff.generateOutputVariable: don't use shape function to determine number of outputs

* Range fix

* - NDArray constructor updated for scalars/empty arrays
- few tests fixed

* More fixes

* Empty creator fixes

* concat fix

* concat fix

* TF import tests: allow 'both all NaN' and 'both all inf' to pass

* Slice, zero fraction, and reshape fixes

* transpose, gather

* Zero fraction

* scalar cast fix

* Empty reduction axis support

* few more tests fixed

* Fixed input checks conforming with TF for concat op and tests.

* few tests fixed

* matmul scalar shape fix

* Fixed checkout for data type and scalarity with concat to allow non-empty scalars with vector concats.

* broadcast bool fix

* few more tests

* few more tests

* correct evalReduceShapeInfoEmpty

* argmax/argmin + tests

* one more empty edge case + one more test

* argmax/argmin/realdiv_bp tweaks

* empty reshape test + fix

* Helper fixes

* Small fixes

* Gather test fix

* Gather test fix

* Small fixes

* reduce scalar zero values

* scalar mean workaround

* Remove debug code

* along dim mean workaround

* one more test

* - equalsTo() tweak for empty arrays
- one more test

* broadcast tweaks

* [WIP] Fixing outstanding issues for NLP (#9)

* Avoid using not-inited objects

* Test fixed.

* Redundant method avoided for models like FastText

* KMeans++ implementation

* KMeans++ implementation

* Disable parallel execution

* KMeans++

* Tests

* Dev branch merge (#16)

* SameDiff: convertDataType and gradient check util improvements (#12)

* GradCheck util improvements

* StopGradient constructor + test

* SameDiff: Add datatype conversion

* Javadoc and add DataType.isNumerical()

* Small fix

* Fix SameDiff TF import test cases intermediate naming (workaround for bad default)

* TFGraphTestAllHelper: check intermediates in execution order

* Add missing debug listener

* [WIP] lstmBlock fix + other changes (#13)

- fixes lstmBlock issue
- changes NDArray method reshape(), permute(), transpose() by making them return instance instead of pointer
- CheckNumerics op
- fixes for ReduceBool IsInfOrNan & IsFinite

* Small test fix

* CheckNumerics op wrapper

* Fix some issues on master (#17)

* Fix DataVec test issue

* Fix issue with dl4j SameDiff output layer

* Dtype fix for lambda layers

* #7912 BertIterator dtype fix (use float32 not global default)

* [WIP] Next set of CUDA stuff (#7)

New CUDA implementations and improvements

* bad file

* Dev branch master merge (#23)

* SameDiff: convertDataType and gradient check util improvements (#12)

* GradCheck util improvements

* StopGradient constructor + test

* SameDiff: Add datatype conversion

* Javadoc and add DataType.isNumerical()

* Small fix

* Fix SameDiff TF import test cases intermediate naming (workaround for bad default)

* TFGraphTestAllHelper: check intermediates in execution order

* Add missing debug listener

* [WIP] lstmBlock fix + other changes (#13)

- fixes lstmBlock issue
- changes NDArray method reshape(), permute(), transpose() by making them return instance instead of pointer
- CheckNumerics op
- fixes for ReduceBool IsInfOrNan & IsFinite

* Small test fix

* CheckNumerics op wrapper

* Compatibility of deserialization (#18)

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* SameDiff: add activation gradient checking support for debugging (#19)

* SameDiff gradient checker: first pass on activation gradient checks

* Fixes + tests for activation gradient checking

* Javadoc

* [WIP] Some nd4j data type corrections (#20)

* Adjust data type

* Set correct Data type.

* Size of proper data type.

* fix averaged cpu load (#22)

* SameDiff ops, TF import and fixes (#24)

* CheckNumerics tests + fixes + misc fixes

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* Fake quant

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* Fixes

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* FakeQuantWithMinMaxArgs

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* CheckNumerics fix

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* Fix libnd4j ALL_INTS and ALL_FLOATS declaration (uint and bfloat types)

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* Small fix

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* Javadoc

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* Exception tweak

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* fix

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* Fix for out of scope stack allocated var use

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* Ignores

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* Ignore for known failing test (already logged issue)

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* Merge upstream to fork (#25)

* Add thousand-separator commas to TotalParams (#7915)

* Add thousand-separator commas to TotalParams

The number of parameters can be quite large, and it would help the reading of the summary printout to have the TotalParams column & values at the bottom have thousand-separator-commas in them.

* Add thousand-separator commas to MultiLayerNetwork

Corresponding change to MultiLayerNetwork

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* Update contributing and issue/PR templates (#7934)

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* Fix link to AdaDelta paper (#7942)

Fix link to AdaDelta paper hosted on matthewzeiler.com

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* Fixes, and ignores for known/logged failing issues (#7943)

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* SameDiff + DL4J/SameDiff: Multiple fixes (#28)

* #7919 HDF5 attribute buffer length fix

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* #7909 Arbiter constructor exception ux improvements

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* #7925 RNN output layer length checks

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* #7939 Add listener for validating inputs are not incorrectly modified

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* #7939 Integrate NonInplaceValidationListener into tests

* #7844 DL4J SameDiff fixes for variable minibatch size

* DL4J SameDiff fixes - ensure gradient for input placeholder is available

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* Tweaks to ExternalErrorsFunction - use placeholders, make more robust

* Another fix

* More fixes

* More SameDiff/DL4J fixes

* Scope out scalar array creation in BaseScalarOp

* Remove debug code

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* [WIP] Final dev branch merge (#29)

* SameDiff: convertDataType and gradient check util improvements (#12)

* GradCheck util improvements

* StopGradient constructor + test

* SameDiff: Add datatype conversion

* Javadoc and add DataType.isNumerical()

* Small fix

* Fix SameDiff TF import test cases intermediate naming (workaround for bad default)

* TFGraphTestAllHelper: check intermediates in execution order

* Add missing debug listener

* [WIP] lstmBlock fix + other changes (#13)

- fixes lstmBlock issue
- changes NDArray method reshape(), permute(), transpose() by making them return instance instead of pointer
- CheckNumerics op
- fixes for ReduceBool IsInfOrNan & IsFinite

* Small test fix

* CheckNumerics op wrapper

* Compatibility of deserialization (#18)

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* SameDiff: add activation gradient checking support for debugging (#19)

* SameDiff gradient checker: first pass on activation gradient checks

* Fixes + tests for activation gradient checking

* Javadoc

* [WIP] Some nd4j data type corrections (#20)

* Adjust data type

* Set correct Data type.

* Size of proper data type.

* fix averaged cpu load (#22)

* [WIP] Multiple dataset iterators (#27)

* Splitting dataset into arbitrary number

* Fixes

* Multiple split of iterator

* Test

* Test

* Some fixes

* signature change

* one more tweak

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* one more test for sequential use of DataSetIteratorSplitter

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* Fixes

* Fixes

* one more test for Alexander

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* Some fixes

* Some fixes

* one more test for Alexander

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* minor test fix

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* Some fixes

* Some fixes

* couple of assertions tweaked

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* MDS splitter test :/

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* Minor refactoring

* Multi dataset

* Some fixes

* More tests

* Small number of test fixes/improvements (failures on CI) (#31)

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* [WIP] More CUDA stuff (#26)

* initial commit

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* LRN BP CUDA

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* less memory

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* Fixed bug with crop_and_resize op helper.

* get rid of unnecessary index-calculation dunction

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed sort with nth_element cuda-based helper.

* Refactored nth_element.

* Refactored nth_element op and tests.

* Modified usage of dim array with sortTad routine.

* Refactored main routine of helper for non_max_image_suppression op.

* non_max_image_suppression op helper with cuda kernel implementation. Initial revision.

* fix vol2col cuda kernel

* meh

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* topK concept

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* unsorted topK with scanWitdh of 1

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* correct vol2col tests

* sorted/unsorted topK

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* implementation and fixing col2im/col2vol

* Corrected usage flags with input/output with reverse op.

* dup is const now

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* percentile op

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* group tests for mapool2d

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* special test for george

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* less threads for sortTad

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* provide conv2d for cuda

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* remove auther in sort tad kernel code

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* provide depthwise_conv2d for cuda

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* - max_pooling_with_argmax
- null check for special use

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* dts cuda

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* provide sconv2d for cuda

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* std cuda

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* Refactored non_max_suppression op to conform TF implementation.

* Improved suppression helper.

* provide pooling3d for cuda

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* minor lstm rearrangements

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* more of minor lstm rearrangements

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* (bi)dynamic_rnn

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* templates init order

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* Refactored non_max_suppression op.

* Added cuda kernel for non_max_suppression.

* CPU sort by key/value

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* CPU sort TAD by key/value

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* CPU sort TAD by key/value tests

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* Eliminate compiler error with cuda implementation.

* - repaired gradCheck in cuda
- provide conv2d_bp for cuda

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* missed signature

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* provide depthwise_conv2d_bp for cuda

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* Implementation of lup helper with cuda kernel. Initial commit.

* further work on backprops for convolutions

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* CUDA linear sort by key/val

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* CUDA tad sort by key/val

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* start providing of backprop for pooling2d/3d

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* Added atomicAdd for bool datatype.

* dynamic partition concept

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* dynamic partition concept

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* dynamic partition scalar CUDA

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* important comment

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* fix pooling2d/3d backprop helpers

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* Added non-linear test with dynamic_partition.

* Improved test for dynamic_partition.

* dynamic_partition TAD concept

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* - dynamic_partition TAD CUDA impl
- dynamic_partition TAD CPU fix

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* - rewrite cpu code for usampling2d/3d
- write cuda code for usampling2d/3d

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* dynamic_stitch CUDA vector case

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* dynamic_stitch CUDA TAD case concept

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* dynamic_stitch CUDA TAD case impl

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* Added tests for dynamic_stitch 3D-4D cases.

* minor tests tweaks

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* Fixed type check for dynamic stitch.

* min/max bp

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* rewrite code for upsampling2d/3d cpu

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* reduce min/max/norm_max bp

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* lup implementation. Additional enhancements.

* provide code for upsamling2d/3d backprop

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* weightedCrossEntropyWithLogits

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* Fixed template math atomicMul for 64bit ints.

* Refactored dynamic_partition_bp op.

* inverseBroadcast fix

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* DynamicPartitionBP test datatype fixed.

* - nd4j_atomicMul Windows fix
- cpu/NDArrayLambda.hpp excluded from CUDA

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2019-06-27 18:37:04 +03:00
Alex Black 68ea5f3688
Dev branch merge: dev_20190606 (#7904)
* correct logsoftmax looss (#2)

* Small SameDiff listener fix (#4)

* Various fixes (#6)

* #7839 Fix for asXMatrix and tests

* #7866 EmbeddingSequenceLayer dtype fix + test

* #7856 SameDiff save/load stream methods

* #7859 RegressionEvaluation rank 4 fix + tests + axis configuration

* EvaluationBinary 3d/4d

* More evaluation 3d/4d tests

* #7847 Evaluation empty checks

* Small test ifx

* #7848 Fix median edge case

* Improve DL4J samediff layer tests

* [WIP] FastText wrapper implemented (#8)

* FastText implemented

* Some fixes

* Fix shapes for wordsNearest

* Validation of input vectors

* Fixes

* Fixed test

* Thread tagged

* Some tweaks

* setContextClassLoader for DeallocatorServiceThread

* Numpy format tests (#1)

* Various fixes (#11)

* #7852 SameDiff gather fix

* #7892 SameDiff placeholder to constant conversion

* #7890 validate input rank for MLN/CG init methods

* Fix broken permute shape calculation

* Permute and gather fixes

* Tests

* #7850 LogSumExp fix + test

* Handful of test fixes

* Empty arrays with non-scalar shapes (#10)

* minor rearrangements for lambdas

* empty tensors with non-scalar shapes

* numpy empty tensors with non-scalar shapes

* few more empty tweaks

* Small fixes

* conv3d signature update

* micro fix in batchnorm mkldnn

* Import fixes

* Fix

* MKL-DNN update

* Small fill fix

* fill with empty input + test

* Fixes

* Small error improvement

* Fix

* one special test

* couple of fixes for lstm

* Rewrite TFGraphMapper.getNDArrayFromTensor to be maintainable and less error prone

* Fixes

* FP16

* Unsigned

* BFloat16

* Fill op - empty tweaks

* - couple of fixes for empty arrays construction
- stack updated

* strided slice fix

* one transform test

* provide method for reducing shapeInfo in case of input array is empty

* Fixed reduceAlongDimensions to use empty input properly.

* couple of broadcast tests

* couple of tests broadcast tests + tweak to make them pass

* add check of non-empty to methods producing sub-arrays

* Fixed reshapeC with zeros in shape.

* complete empty check in reduce_... legacy ops

* Concat and cumsum/prod

* Tweak to empty shape inference on import

* add empty check to the rest of reduce legacy ops

* one more test

* correct typo in evalReduceShapeInfoEmpty

* Added tests for reduce_* ops to tests with zero shapes.

* few more tests for empty reductions

* Fixed strided_slice op with empty case and tests.

* one more empty reduction test

* Fixed strided_slice test.

* add empty check to NDArray::reshapei

* infOrMax

* empty min/max with infinity tests

* made unstack working correctly with empty arrays

* few IndexReduce tests + tweaks for empty shapes

* add test for empty concat

* few tests fixed

* Validation fix for reductions on empty shapes

* Reverse fix

* Reduction shape calc fixes

* SameDiff.generateOutputVariable: don't use shape function to determine number of outputs

* Range fix

* - NDArray constructor updated for scalars/empty arrays
- few tests fixed

* More fixes

* Empty creator fixes

* concat fix

* concat fix

* TF import tests: allow 'both all NaN' and 'both all inf' to pass

* Slice, zero fraction, and reshape fixes

* transpose, gather

* Zero fraction

* scalar cast fix

* Empty reduction axis support

* few more tests fixed

* Fixed input checks conforming with TF for concat op and tests.

* few tests fixed

* matmul scalar shape fix

* Fixed checkout for data type and scalarity with concat to allow non-empty scalars with vector concats.

* broadcast bool fix

* few more tests

* few more tests

* correct evalReduceShapeInfoEmpty

* argmax/argmin + tests

* one more empty edge case + one more test

* argmax/argmin/realdiv_bp tweaks

* empty reshape test + fix

* Helper fixes

* Small fixes

* Gather test fix

* Gather test fix

* Small fixes

* reduce scalar zero values

* scalar mean workaround

* Remove debug code

* along dim mean workaround

* one more test

* - equalsTo() tweak for empty arrays
- one more test

* broadcast tweaks
2019-06-15 21:34:34 +10:00
skymindops b5f0ec072f Eclipse Migration Initial Commit 2019-06-06 15:21:15 +03:00