Commit Graph

7 Commits (4cb87a94e859a066267fc5c365ed80b51e35486f)

Author SHA1 Message Date
Alex Black f5f77df846
Dependency version upgrades + small SameDiff fix (#405)
* #8861 Training evaluation on variables not required for loss fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* Dependency version updates flagged by dependabot

Signed-off-by: Alex Black <blacka101@gmail.com>
2020-04-23 15:38:42 +10:00
Alexander Stoyakin ccb216a3ed
Fixing issues from Sonar report (#391)
* Fixing issues from Sonar report

* Proper logger of exceptions

* Coding style fixes

* Use dup parameter

* Cleanup, minor issues

* Cuda compilation fixed and some minor fixes
2020-04-23 08:36:49 +10:00
Alexander Stoyakin 455a5d112d
Fixes for codegen generated classes and build improvements (#367)
* Input format extended

* Deleted redundant code

* Added weights format to conv2d config

* Refactoring

* dl4j base test functionality

* Different tests base class per module

* Check base class for dl4j-graph subproject tests

* Check if test classes extend BaseDL4JTest

* Use nd4j-common-tests as transient dependency

* Enums and tests added

* Added codegenerated methods

* Use namespace methods

* Replace DifferentialFunctionFactory  with codegenerated classes

* Fixed linspace

* Namespaces regenerated

* Namespaces used instead of factory

* Regenerated base classes

* Input format extended

* Added weights format to conv2d config

* Refactoring

* dl4j base test functionality

* Different tests base class per module

* Check base class for dl4j-graph subproject tests

* Check if test classes extend BaseDL4JTest

* Use nd4j-common-tests as transient dependency

* Enums and tests added

* Added codegenerated methods

* Use namespace methods

* Replace DifferentialFunctionFactory  with codegenerated classes

* Fixed linspace

* Namespaces regenerated

* Regenerated base classes

* Regenerated namespaces

* Generate nd4j namespaces

* INDArrays accepting constructors

* Generated some ops

* Some fixes

* SameDiff ops regenerated

* Regenerated nd4j ops

* externalErrors moved

* Compilation fixes

* SquaredDifference - strict number of args

* Deprecated code cleanup. Proper base class for tests.

* Extend test classes with BaseND4JTest

* Extend test classes with BaseDL4JTest

* Legacy code

* DL4J cleanup

* Exclude test utils from base class check

* Tests fixed

* Arbiter tests fix

* Test dependency scope fix + pom.xml formatting

Signed-off-by: Alex Black <blacka101@gmail.com>

* Significant number of fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Another round of fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Another round of fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Few additional fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* DataVec missing test scope dependencies

Signed-off-by: Alex Black <blacka101@gmail.com>

Co-authored-by: Alex Black <blacka101@gmail.com>
2020-04-20 10:27:13 +10:00
raver119 7ef0ef907e
Packages fix (#193)
* packages fix

Signed-off-by: raver119 <raver119@gmail.com>

* few imports fixed

Signed-off-by: raver119 <raver119@gmail.com>

* few imports fixed

Signed-off-by: raver119 <raver119@gmail.com>
2020-01-27 23:04:21 +03:00
Alex Black a25bb6a11c
Unit/integration test split + test speedup (#166)
* Add maven profile + base tests methods for integration tests

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Switch from system property to environment variable; seems more reliable in intellij

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Add nd4j-common-tests module, and common base test; cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Ensure all ND4J tests extend BaseND4JTest

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Test spam reduction, import fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Add test logging to nd4j-aeron

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix unintended change

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Reduce sprint test log spam

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More test spam cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Significantly speed up TSNE tests

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* W2V iterator test unit/integration split

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More NLP test speedups

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Avoid debug/verbose mode leaking between tests

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* test tweak

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Arbiter extends base DL4J test

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Arbiter test speedup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* nlp-uima test speedup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More test speedups

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix ND4J base test

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Few small ND4J test speed improvements

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J tests speedup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More tweaks

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Even more test speedups

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More tweaks

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Various test fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* More test fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Add ability to specify number of threads for C++ ops in BaseDL4JTest and BaseND4JTest

Signed-off-by: Alex Black <blacka101@gmail.com>

* nd4j-aeron test profile fix for CUDA

Signed-off-by: Alex Black <blacka101@gmail.com>
2020-01-22 22:27:01 +11:00
raver119 29e8e09db6
String changes (#3)
* initial commit

* additional data types & tensor type

Signed-off-by: raver119 <raver119@gmail.com>

* next step

Signed-off-by: raver119 <raver119@gmail.com>

* missing include

* sparse_to_dense

Signed-off-by: raver119 <raver119@gmail.com>

* few more tests files

Signed-off-by: raver119 <raver119@gmail.com>

* draft

Signed-off-by: raver119 <raver119@gmail.com>

* numeric sparse_to_dense

Signed-off-by: raver119 <raver119@gmail.com>

* comment

Signed-off-by: raver119 <raver119@gmail.com>

* string sparse_to_dense version

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA DataBuffer expand

Signed-off-by: raver119 <raver119@gmail.com>

* few tweaks for CUDA build

Signed-off-by: raver119 <raver119@gmail.com>

* shape fn for string_split

Signed-off-by: raver119 <raver119@gmail.com>

* one more comment

Signed-off-by: raver119 <raver119@gmail.com>

* string_split indices

Signed-off-by: raver119 <raver119@gmail.com>

* next step

Signed-off-by: raver119 <raver119@gmail.com>

* test passes

Signed-off-by: raver119 <raver119@gmail.com>

* few rearrangements for databuffer implementations

Signed-off-by: raver119 <raver119@gmail.com>

* DataBuffer: move inline methods to common implementations

Signed-off-by: raver119 <raver119@gmail.com>

* add native DataBuffer to Nd4j presets

Signed-off-by: raver119 <raver119@gmail.com>

* DataBuffer creation

Signed-off-by: raver119 <raver119@gmail.com>

* use DataBuffer for allocation

Signed-off-by: raver119 <raver119@gmail.com>

* cpu databuffer as deallocatable

Signed-off-by: raver119 <raver119@gmail.com>

* DataBuffer setters for bufers

Signed-off-by: raver119 <raver119@gmail.com>

* couple of wrappers

Signed-off-by: raver119 <raver119@gmail.com>

* DataBuffers being passed around

Signed-off-by: raver119 <raver119@gmail.com>

* Bunch of ByteBuffer-related signatures gone

Signed-off-by: raver119 <raver119@gmail.com>

* - few more Nd4j signatures removed
- minor fix for bfloat16

Signed-off-by: raver119 <raver119@gmail.com>

* nullptr pointer is still a pointer, but 0 as address :)

Signed-off-by: raver119 <raver119@gmail.com>

* one special test

Signed-off-by: raver119 <raver119@gmail.com>

* empty string array init

Signed-off-by: raver119 <raver119@gmail.com>

* one more test in cpp

Signed-off-by: raver119 <raver119@gmail.com>

* memcpy instead of databuffer swap

Signed-off-by: raver119 <raver119@gmail.com>

* special InteropDataBuffer for front-end languages

Signed-off-by: raver119 <raver119@gmail.com>

* few tweaks for java

Signed-off-by: raver119 <raver119@gmail.com>

* pointer/indexer actualization

Signed-off-by: raver119 <raver119@gmail.com>

* CustomOp returns list for inputArumgents and outputArguments instead of array

Signed-off-by: raver119 <raver119@gmail.com>

* redundant call

Signed-off-by: raver119 <raver119@gmail.com>

* print_variable op

Signed-off-by: raver119 <raver119@gmail.com>

* - view handling (but wrong one)
- print_variable java wrapper

Signed-off-by: raver119 <raver119@gmail.com>

* one more test

Signed-off-by: raver119 <raver119@gmail.com>

* - empty arrays handling

Signed-off-by: raver119 <raver119@gmail.com>

* - deserialization works now

Signed-off-by: raver119 <raver119@gmail.com>

* minor fix

Signed-off-by: raver119 <raver119@gmail.com>

* meh

Signed-off-by: raver119 <raver119@gmail.com>

* one more fix

Signed-off-by: raver119 <raver119@gmail.com>

* initial cuda commit

Signed-off-by: raver119 <raver119@gmail.com>

* print_variable message validation

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA views

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA special buffer size

Signed-off-by: raver119 <raver119@gmail.com>

* minor update to match master changes

Signed-off-by: raver119 <raver119@gmail.com>

* - consider arrays always actual on device for CUDA
- additional PrintVariable constructor
- CudaUtf8Buffer now allocates host buffer by default

Signed-off-by: raver119 <raver119@gmail.com>

* meh

Signed-off-by: raver119 <raver119@gmail.com>

* - print_variable now allows print from device

Signed-off-by: raver119 <raver119@gmail.com>

* InteropDataBuffer data type fix

Signed-off-by: raver119 <raver119@gmail.com>

* ...

Signed-off-by: raver119 <raver119@gmail.com>

* disable some debug messages

Signed-off-by: raver119 <raver119@gmail.com>

* master pulled in

Signed-off-by: raver119 <raver119@gmail.com>

* couple of new methods for DataBuffer interop

Signed-off-by: raver119 <raver119@gmail.com>

* java side

Signed-off-by: raver119 <raver119@gmail.com>

* offsetted constructor

Signed-off-by: raver119 <raver119@gmail.com>

* new CUDA deallocator

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA backend torn apart

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA backend torn apart 2

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA backend torn apart 3

Signed-off-by: raver119 <raver119@gmail.com>

* - few new tests
- few new methods for DataBuffer management

Signed-off-by: raver119 <raver119@gmail.com>

* few more tests + few more tweaks

Signed-off-by: raver119 <raver119@gmail.com>

* two failing tests

Signed-off-by: raver119 <raver119@gmail.com>

* one more test

Signed-off-by: raver119 <raver119@gmail.com>

* two failing tests pass

Signed-off-by: raver119 <raver119@gmail.com>

* now we pass DataBuffer to legacy ops too

Signed-off-by: raver119 <raver119@gmail.com>

* Native DataBuffer for legacy ops, Java side

Signed-off-by: raver119 <raver119@gmail.com>

* CPU java side update

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA java side update

Signed-off-by: raver119 <raver119@gmail.com>

* no more prepare/register action on java side

Signed-off-by: raver119 <raver119@gmail.com>

* NDArray::prepare/register use now accepts vectors

Signed-off-by: raver119 <raver119@gmail.com>

* InteropDataBuffer now has few more convenience methods

Signed-off-by: raver119 <raver119@gmail.com>

* java bindings update

Signed-off-by: raver119 <raver119@gmail.com>

* tick device in NativeOps

Signed-off-by: raver119 <raver119@gmail.com>

* Corrected usage of OpaqueBuffer for tests.

* Corrected usage of OpaqueBuffer for java tests.

* NativeOpsTests fixes.

* print_variable now returns scalar

Signed-off-by: raver119 <raver119@gmail.com>

* one more test

Signed-off-by: raver119 <raver119@gmail.com>

* compat_string_split fix for CUDA

Signed-off-by: raver119 <raver119@gmail.com>

* - CUDA execScalar fix
- CUDA lazyAllocateHostPointer now checks java indexer/pointer instead of native pointer

Signed-off-by: raver119 <raver119@gmail.com>

* legacy ops DataBuffer migration prototype

Signed-off-by: raver119 <raver119@gmail.com>

* ignore device shapeinfo coming from java

Signed-off-by: raver119 <raver119@gmail.com>

* minor fix

Signed-off-by: raver119 <raver119@gmail.com>

* minor transformAny fix

Signed-off-by: raver119 <raver119@gmail.com>

* minor tweak for lazy host allocation

Signed-off-by: raver119 <raver119@gmail.com>

* - DataBuffer::memcpy method
- bitcast now uses memcpy

Signed-off-by: raver119 <raver119@gmail.com>

* - IndexReduce CUDA dimension buffer fix

Signed-off-by: raver119 <raver119@gmail.com>

* views for CPU and CUDA

Signed-off-by: raver119 <raver119@gmail.com>

* less spam

Signed-off-by: raver119 <raver119@gmail.com>

* optional memory init

Signed-off-by: raver119 <raver119@gmail.com>

* async memset

Signed-off-by: raver119 <raver119@gmail.com>

* - SummaryStats CUDA fix
- DataBuffer.sameUnderlyingData() impl
- execBroadcast fix

Signed-off-by: raver119 <raver119@gmail.com>

* - reduce3All fix
switch to CUDA 10 temporarily

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA version

Signed-off-by: raver119 <raver119@gmail.com>

* proper memory deallocator registration

Signed-off-by: raver119 <raver119@gmail.com>

* HOST_ONLY workspace allocation

Signed-off-by: raver119 <raver119@gmail.com>

* temp commit

Signed-off-by: raver119 <raver119@gmail.com>

* few conflicts resolved

Signed-off-by: raver119 <raver119@gmail.com>

* few minor fixes

Signed-off-by: raver119 <raver119@gmail.com>

* one more minor fix

Signed-off-by: raver119 <raver119@gmail.com>

* NDArray permute should operate on JVM primitives

Signed-off-by: raver119 <raver119@gmail.com>

* - create InteropDataBuffer for shapes as well
- update pointers after view creation in Java

Signed-off-by: raver119 <raver119@gmail.com>

* - addressPointer temporary moved to C++

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA: don't account offset twice

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA: DataBuffer pointer constructor updated

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA NDArray.unsafeDuplication() simplified

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA minor workspace-related fixes

Signed-off-by: raver119 <raver119@gmail.com>

* CPU DataBuffer.reallocate()

Signed-off-by: raver119 <raver119@gmail.com>

* print_affinity op

Signed-off-by: raver119 <raver119@gmail.com>

* print_affinity java side

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA more tweaks for data locality

Signed-off-by: raver119 <raver119@gmail.com>

* - compat_string_split tweak
- CudaUtf8Buffer update

Signed-off-by: raver119 <raver119@gmail.com>

* INDArray.close() mechanic restored

Signed-off-by: raver119 <raver119@gmail.com>

* one more test fixed

Signed-off-by: raver119 <raver119@gmail.com>

* - CUDA DataBuffer.reallocate() updated
- cudaMemcpy (synchronous) restored

Signed-off-by: raver119 <raver119@gmail.com>

* one last fix

Signed-off-by: raver119 <raver119@gmail.com>

* bad import removed

Signed-off-by: raver119 <raver119@gmail.com>

* another small fix

Signed-off-by: raver119 <raver119@gmail.com>

* one special test

Signed-off-by: raver119 <raver119@gmail.com>

* fix bad databuffer size

Signed-off-by: raver119 <raver119@gmail.com>

* release primaryBuffer on replace

Signed-off-by: raver119 <raver119@gmail.com>

* higher timeout

Signed-off-by: raver119 <raver119@gmail.com>

* disable timeouts

Signed-off-by: raver119 <raver119@gmail.com>

* dbCreateView now validates offset and length of a view

Signed-off-by: raver119 <raver119@gmail.com>

* additional validation for dbExpand

Signed-off-by: raver119 <raver119@gmail.com>

* restore timeout back again

Signed-off-by: raver119 <raver119@gmail.com>

* smaller distribution for rng test to prevent timeouts

Signed-off-by: raver119 <raver119@gmail.com>

* CUDA DataBuffer::memcpy now copies to device all the time

Signed-off-by: raver119 <raver119@gmail.com>

* OpaqueDataBuffer now contains all required methods for interop

Signed-off-by: raver119 <raver119@gmail.com>

* some javadoc

Signed-off-by: raver119 <raver119@gmail.com>

* GC on failed allocations

Signed-off-by: raver119 <raver119@gmail.com>

* minoe memcpu tweak

Signed-off-by: raver119 <raver119@gmail.com>

* one more bitcast test

Signed-off-by: raver119 <raver119@gmail.com>

* - NDArray::deviceId() propagation
- special multi-threaded test for data locality checks

Signed-off-by: raver119 <raver119@gmail.com>

* DataBuffer additional syncStream

Signed-off-by: raver119 <raver119@gmail.com>

* DataBuffer additional syncStream

Signed-off-by: raver119 <raver119@gmail.com>

* one ignored test

Signed-off-by: raver119 <raver119@gmail.com>

* skip host alloc for empty arrays

Signed-off-by: raver119 <raver119@gmail.com>

* ByteBuffer support is back

Signed-off-by: raver119 <raver119@gmail.com>

* DataBuffer::memcpy minor fix

Signed-off-by: raver119 <raver119@gmail.com>

* few minor prelu/bp tweaks

Signed-off-by: raver119 <raver119@gmail.com>

* nullify-related fixes

Signed-off-by: raver119 <raver119@gmail.com>

* PReLU fixes (#157)

Signed-off-by: Alex Black <blacka101@gmail.com>

* Build fixed

* Fix tests

* one more ByteBuffer signature restored

Signed-off-by: raver119 <raver119@gmail.com>

* nd4j-jdbc-hsql profiles fix

Signed-off-by: raver119 <raver119@gmail.com>

* nd4j-jdbc-hsql profiles fix

Signed-off-by: raver119 <raver119@gmail.com>

* PReLU weight init fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* Small PReLU fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* - INDArray.migrate() reactivated
- DataBuffer::setDeviceId(...) added
- InteropDataBuffer Z syncToDevice added for views

Signed-off-by: raver119 <raver119@gmail.com>

* missed file

Signed-off-by: raver119 <raver119@gmail.com>

* Small tweak

Signed-off-by: Alex Black <blacka101@gmail.com>

* cuda 10.2

Signed-off-by: raver119 <raver119@gmail.com>

* minor fix

Signed-off-by: raver119 <raver119@gmail.com>

Co-authored-by: shugeo <sgazeos@gmail.com>
Co-authored-by: Alex Black <blacka101@gmail.com>
Co-authored-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>
2020-01-04 13:27:50 +03:00
skymindops b5f0ec072f Eclipse Migration Initial Commit 2019-06-06 15:21:15 +03:00