Commit Graph

1074 Commits (4852cb975fa8f755250299902d083880965024ab)

Author SHA1 Message Date
Alex Black ed5a2e56f9
Merge pull request #8931 from KonduitAI/master
bump up shared memory (#449) [WIP]
2020-05-11 23:58:36 +10:00
raver119 05c0f12c73
bump up shared memory (#449)
Signed-off-by: raver119@gmail.com <raver119@gmail.com>
2020-05-11 16:55:23 +03:00
Alex Black 9db86cec7a
Merge pull request #8930 from KonduitAI/master
Development updates
2020-05-11 22:57:02 +10:00
Alex Black 0d8b2d65cd Merge remote-tracking branch 'eclipse/master' 2020-05-11 22:53:22 +10:00
raver119 f0adb6f788
[WIP] minor fixes (#447)
* couple of tests disabled

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* few syncs removed, some logging added

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* some logging added

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* some logging added

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* fix min num_threads

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* fixed wrong release function for scalarPointer

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2020-05-11 15:41:43 +03:00
Alex Black b786418c5d
Fix an issue when creating DataBuffer/INDArray from ByteBuffer for multiple datatypes (#446)
* Fix missing dtypes when creating DataBuffer from ByteBuffer

Signed-off-by: Alex Black <blacka101@gmail.com>

* Revert LongIndexer -> ULongIndexer; fixes for UIntIndexer

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* CUDA fix

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2020-05-11 21:29:52 +10:00
Alex Black a76f957b72
Merge pull request #8872 from printomi/ui_multisession_arbiter
DL4J UI: Add multi-session support for Arbiter
2020-05-11 19:24:17 +10:00
Alex Black 91a2004d8f
Assorted fixes (#445)
* #8890 TestTransferStatsCollection timeout fix

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* #8890 RegressionTest timeout fix

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* Increase timeout for flaky test

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* Remove test dependency

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* BLAS iamax + loop -> argmax

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2020-05-11 15:57:00 +10:00
Alex Black 57d16653c8 Merge remote-tracking branch 'eclipse/master' 2020-05-11 12:55:36 +10:00
Paul Dubs 2cdb2b3447
Remove GloVe (#437)
GloVe has been unmaintained and broken for a long time. The only people asking about it where those who were stumped by the broken example.

GloVe on its own has one intrinsic problem: a vocabulary of size N requires to build a matrix of NxN. This resulted in suboptimal performance for most people.

Overall, there are better performing approaches these days so it isn't worth the effort to fix this implementation.

Signed-off-by: Paul Dubs <paul.dubs@gmail.com>
2020-05-11 12:31:28 +10:00
Alex Black ea56ce7471 Import fix given recent refactoring
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2020-05-11 12:25:31 +10:00
Alex Black 20f451e807 Merge remote-tracking branch 'eclipse/master' into ui_multisession_arbiter 2020-05-11 11:49:50 +10:00
Alex Black 58fe365c21
Merge pull request #8908 from hosuaby/feature/loadModelFromStream
FEATURE: change API of WordVectorSerializer. Add posibility to read m…
2020-05-11 11:45:48 +10:00
Alex Black 6844cfe126
Merge pull request #8929 from KonduitAI/master
Development updates
2020-05-09 20:00:02 +10:00
Alex Black e883256400 Merge remote-tracking branch 'eclipse/master' 2020-05-09 19:58:07 +10:00
raver119 10d6c3b024
do not relocate stuff on java side (#444)
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2020-05-09 12:56:45 +03:00
raver119 2849299bfb
Fix for https://github.com/eclipse/deeplearning4j/issues/8909 (#430)
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2020-05-09 08:09:26 +03:00
raver119 320924278d
Legacy API changes (#441)
* initial commit

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* another initial commit

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* another initial commit

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* one more initial commit

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* next step

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* next step

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* next step

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* next step

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* Refactored buffer() and shapeInfo() methods usage with NDArray class.

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* Adopt Graph class methods to use const shapes.

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* Adopt choose op to use constant shapes.

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* Adopt where op shape method to use constant shapes.

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* Adopt lstsq op to use constant empty shapes.

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* Adopt matrix_diag_part op shape routine to use constant shapes.

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* Adopt determinant ops to use constant shapes.

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* Adopt mean_pairwssqerr_loss ops to use constant shapes.

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* Adopt ops shape methods.

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* Adopt shape methods for loss ops.

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* Adopt log_loss op shape method.

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* Adopt shape methods for ops.

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* Adopt dilation2d ops shape methods.

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* Adopted deconv2d ops shape methods.

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* Adopted dynamicRNN op shape method.

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* Adopted shape methods for ops.

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* Adopted shape methods for lstm layer ops.

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* few updates

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* first cuda tweak

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* Adopt constant shapes for sconv2d ops.

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* Adopt constant shapes for gru ops.

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* Adopt constant shapes with shape methods for segment ops and so on.

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* Adopted constant shapes with unsorted_segment_* ops.

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* Adopted constant shapes with gamma op shape method.

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* Adopted shape methods of reduce_stddev ops.

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* Adopted shape methods for reduce_* ops.

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* Adopt shape method for squeeze op.

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* Adopt strided_slice shape method.

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* Refactored concat op shape method to adopt constant shapes.

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* Adopted shape method for mirror_pad op.

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* Adopted split op shape method.

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* Adopted tile ops shape methods.

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* Added const cast for mkldnn routines handles.

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* Refactored logSoftMaxForVector_ routine to conform with proper data and shape pointer casts.

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* Cosmetic changes to proper usage of constant pointers.

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* Refactored a couple shape comparators for strides and addBias helpers to proper use data pointers with inplace option.

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* Refactored depthToSpace helpers.

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* Refactored histogram helpers.

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* Refactored im2col helpers.

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* Refactored gather and gatherND helpers.

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* Fixed buffer usage on percentile helper.

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* Fixed gather shape with helpers and range buffer usage.

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* Fixed buffer usage with space to depth helpers.

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* Fixed buffer usage and constant shapes.

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* Fixed buffer usage with LUP decomposition>

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* Refactored onehot_ helper.

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* Refactored pad and prefix to use constant shapes.

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* Refactoed softmax helpers.

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* Fixed space to batch helpers to use buffers properly.

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* Fixed stack and split helpers.

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* Fixed buffer usage with sparse to dense helpers.

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* Fixed buffer usage with mindistance_ helpers.

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* Fixed buffer usage with tile helper.

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* Fixed constant shape usage.

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* Fixed constant shape usage with legacy pairwise bool ops.

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* Refactored a couple of methods to adopt constant shape usage.

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* Fixed broadcasting with constant shape."

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* Fixed const usage with inplace reverse and constant shapes with legacy reduction.

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* Refactored legacy ops with const shapes.

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* Refactored sort to adopt constant shapes.

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* Corrected sort for constant shape usage.

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* Fixed constant shape usage with special methods.

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* Refactored Context to conform with constant shape usage.

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* CUDA broadcasting headers

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* pairwise/indexreduce/random headers

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* Refactored native ops to adopt constant shapes.

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* legacy reduce3/scalar headers

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* Corrected pullRow signature and tests.

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* Corrected routines to proper use of constant shapes.

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* Refactored tests to use constant shapes properly.

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* Refactored legacy ops tests to use constant shapes properly.

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* Refactored buffer usage with NDArray tests.

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* Fixed native ops tests.

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* Fixed special concat routine.

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* Fixed buffer usage with test.

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* Fixed buffer usage with a test.

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* Refactored TAD.h and tests.

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* Refactored calcStrides* routines to use constant shapes.

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* Fixed miscelaneous errors with constant shapes.

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* NativeOps const changes

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* Corrected definitions for declared functions.

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* NativeOps const changes

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* few more const changes

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* Fixed const shapes with shape routines.

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* few more const changes

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* Fixed shape method for broadcastable case.

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* few more const changes

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* xw_plus_b BP shape fn restored

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* Fixed signatures with broadcasting.

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* Repaired backprops shape methods for a set of operations.

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* Refactored broadcast bool for cuda.

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* Refactored methods for 3 args with const qualifier.

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* Fixed a couple of kernel signatures for broadcasting.

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* Fixed kernels signatures for const buffers and shapes.

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* Refactored pairwise methods to persistent buffers and shapes usage.

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* Adopt const to buffers and shapes with kernels.

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* Adopt const to buffers and shapes with scalar kernels.

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* Refactored indexreduce kernels signatures to use const buffers and shapes.

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* Refactored pairwise kernels to adopt cons shapes and buffers.

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* Refactored pairwise bool kernels to adopt cons shapes and buffers.

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* Refactored random special ops to conform with const shapes and buffers.

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* Refactored native ops to conform with const shapes and buffers under cuda platform.

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* Cosmetical changes only.

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* Fixed const shapes and buffers error.

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* Corrected start pos routine.

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* Refactored methods to conform with const shapes and buffers.

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* Refactored helpers to use proper methods instead.

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* bunch of changes

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* next bunch of changes

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* next bunch of changes

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* Fixed execScalar declaration.

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* Fixed execScalar declaration.

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* Corrected const shape cases with sort and so on.

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* Fixed const shapes for sort.

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* Refactored kernel declarations to adopt const shapes.

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* Fixed kernels declarations to adopt const shapes.

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* Corrected kernel declarations to adopt const shapes and buffers.

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* Fixed kernels declarations to adopt const shapes.

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* Fixed segment helpers kernels declarations and so on to adopt const shapes.

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* Fixed const shape usage with segment and solve helpers.

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* Fixed kernel declaration with adjustWeight helper.

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* Fixed cuda implementations for constant shape helpers.

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* Adopted const shape usage with kernels.

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* Adopted top_k kernels to use const shapes and buffers.

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* Corrected kernels declarations to adopt const shapes with helpers.

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* Refactored NDArray definitions to adopt const shapes and buffers.

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* Fixed const shapes with image suppression helpers.

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* Slight improvement with buffers.

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* Refactored buffer usage.

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* Refactored buffer usage with tests.

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* Fixed const shape usage with definitions.

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* minor updates on cpu side

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* Refactored const shape usage with ConstantDescritor and native ops with cuda platform.

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* Refactored tear and tile kernels to adopt with const shapes.

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* softmax_loop fix

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* update missing signature

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* softmax again

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* few more missing consts

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* new methods updated

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Co-authored-by: shugeo <sgazeos@gmail.com>
2020-05-09 08:06:14 +03:00
raver119 0613485654
compression ops (#436)
* Added declarations for decode/encode_bitmap ops.

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* Added implementation for bitmap encoding/decoding ops.

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* Added helpers for encode/decode bitmap ops.

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* Refactored encodingBitmap helper.

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* threshold encode/decode skeleton

* helper skeleton

* minor import fix

* encoder shape fn & op impl

* thresholdEncode cpu impl

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* thresholdDecode cpu impl

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* Only cosmetical changes.

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* placeholder

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* Added cuda implementation for bitmap decode helper.

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* cuda thresholdEstimate

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* cuda thresholdDecode

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* next step

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* - nano cmakelist update (get rid of Clion section)
- fixed forgotten throw in AtomicTests

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* thesholdEncode cuda impl

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* Added tests for bitmap encoding/decoding ops.

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* Fixed tests for encode/decode bitmaps.

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* Refactored decode/encode helpers.

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* Fixed crashes with bitmap decode/encode helpers.

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* bitmap encode/decode CPU

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* bitmap encode/decode CUDA

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* C API removed for threshold/bitmap encode

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* EncodeBitmap/DecodeBitmap Java side

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* EncodeThreshold/DecodeThreshold Java side

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* EncodeThreshold/DecodeThreshold Java side

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* few more tests for threshold encoding

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* minor test tweak

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* two special tests

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* encodeBitmap CPU fix

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* parallel_long/parallel_double proper spans fix

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* encodeThreshold CUDA fix

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* nano fix

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* grid tweaks

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* RTX adaptation for thresholdEncode

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* don't allow threshold encoding for length < 2

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* get rid of NDArrayCompressor in EncodingHandler

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* one more minor update of EncodingHandler

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* one more minor tweak of EncodingHandler

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* - matmul allows integer data types use
- EncodingHandler boundary default value
- few tests for integer matmul

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* minor fix of CUDA bitmap encode

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* boundary changed to integer everywhere

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* boundary changed to integer everywhere

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* re-enable CUDA deallocator

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* threshold encoder fix for systems without omp

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* - encode_threshold now requires non-negative boundary
- minor tweak in EncodingHandler

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* restore parallelism in decode_bitmap

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* fall back to omp for encode_bitmap cpu

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* single time casts

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* - additional test for encode_threshold
- sync buffers to device before calling for shape function

Signed-off-by: raver119@gmail.com <raver119@gmail.com>

Co-authored-by: shugeo <sgazeos@gmail.com>
2020-05-08 20:59:39 +03:00
Tamás Fenyvesi 9f47c8aca8 narrow down UIServer.stop() to declare throwing InterruptedException; fix typo in test
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:08:01 +02:00
Tamás Fenyvesi cf24728f35 tests for auto-attach and manual attach; improve JavaDoc
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:08:00 +02:00
Tamás Fenyvesi 55be669069 use last completed task for Total Runtime instead of currentTimeMillis in ArbiterModule Summary Status
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:07:59 +02:00
Tamás Fenyvesi cf11c2394a fix session list relative links in TrainModule and ArbiterModule; fix auto-attach in ArbiterModule at arbiter/sid
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:07:59 +02:00
Tamás Fenyvesi 8f55214d1b JavaScript side of multi-session support in Arbiter UI
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:07:58 +02:00
Tamás Fenyvesi 64c9008ea7 multi-session routes in ArbiterModule, optimize getLastUpdateTime
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:07:55 +02:00
Tamás Fenyvesi d3c759e03f [WIP] basic handling of multi-session in ArbiterModule (routes: arbiter, arbiter/multisession)
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:06:16 +02:00
Tamás Fenyvesi f1ebced7a1 simplify TrainModule to use getters of VertxUIServer instance for multi-session mode, session loader and server address
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:06:07 +02:00
Tamás Fenyvesi ef7c21c204 fix logging of UI server auto-stop, fix indentation in test
Signed-off-by: Tamás Fenyvesi <tamas.fenyvesi@doknet.hu>
2020-05-08 13:02:30 +02:00
Alexei KLENIN c7ea7e17f8 FIX: tests
Signed-off-by: hosuaby <alexei.klenin@gmail.com>
2020-05-08 12:42:29 +02:00
Paul Dubs f1232f8221
Drop stale documentation (#438)
The current documentation can be found on https://deeplearning4j.konduit.ai/ and soon in a new git repository too.

The documentation in this repository has been stale for a while and keeping it around will only serve to confuse people.

Signed-off-by: Paul Dubs <paul.dubs@gmail.com>
2020-05-08 15:39:41 +10:00
Samuel Audet 53920a0724
Update dependencies for OpenBLAS 0.3.9-1 (#440)
Signed-off-by: Samuel Audet <samuel.audet@gmail.com>
2020-05-08 15:33:28 +10:00
Jeanne-Kamikaze 965d45e3a3
Fix doc. (#8905)
"By either a String *or a Path*"

Signed-off-by: Marc Sunet <msunet@shellblade.net>
2020-05-06 09:59:53 +02:00
Alex Black 37d880a23c
Merge pull request #8923 from KonduitAI/master
Development updates
2020-05-06 16:53:46 +10:00
Alex Black 615a48f0cf
Fixes (#434)
* #8901 Avoid unnecessary warning in SameDiffLoss

Signed-off-by: Alex Black <blacka101@gmail.com>

* Improved error messages for conv2d layers - NCHW vs. NHWC

Signed-off-by: Alex Black <blacka101@gmail.com>
2020-05-05 12:24:03 +10:00
Alex Black 7651a486e1
#8201 ImageLoader/NativeImageLoader NHWC support (#432)
Signed-off-by: Alex Black <blacka101@gmail.com>
2020-05-04 17:17:57 +10:00
Alex Black b70e02a915
Fix deeplearning4j-util dependency + update remnants still using it (#428)
Signed-off-by: Alex Black <blacka101@gmail.com>
2020-05-04 15:54:03 +10:00
Alex Black 092e6b9891
ImageRecordReader - NHWC support (#431)
* #8201 ImageRecordReader - NHWC support

Signed-off-by: Alex Black <blacka101@gmail.com>

* Check values - NCHW vs. NHWC

Signed-off-by: Alex Black <blacka101@gmail.com>
2020-05-04 14:25:19 +10:00
hosuaby dab75fa50b FEATURE: change API of WordVectorSerializer. Add posibility to read models from InputStreams and not only from files
Signed-off-by: hosuaby <alexei.klenin@gmail.com>
2020-05-02 18:48:22 +02:00
Paul Dubs 4dbdaca967
Add support for registering custom loss functions for Keras import (#427)
Signed-off-by: Paul Dubs <paul.dubs@gmail.com>
2020-05-02 16:08:04 +10:00
raver119@gmail.com 6c9a14d8c2 added missing copyright :)
Signed-off-by: raver119@gmail.com <raver119@gmail.com>
2020-05-01 22:22:34 +03:00
raver119@gmail.com c1e4613dba rootDir null validation in ExistingMiniBatchDataSetIterator
Signed-off-by: raver119@gmail.com <raver119@gmail.com>
2020-05-01 22:11:56 +03:00
Alex Black 88ef784b7c
Merge pull request #8899 from KonduitAI/master
Latest development updates
2020-05-01 18:48:52 +10:00
Alex Black e64fbbdc9b
Re-enable datavec-geo and datavec-hadoop as module in pom.xml; update imports (#425)
* Re-enable datavec-geo and datavec-hadoop as module in pom.xml; update imports

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix parent pom and cyclical dependency

Signed-off-by: Alex Black <blacka101@gmail.com>
2020-05-01 17:32:29 +10:00
raver119@gmail.com 668d773993 windows build instructions minor update 2020-04-30 18:13:09 +03:00
raver119@gmail.com a6ca87dce6 one deprecated method
Signed-off-by: raver119@gmail.com <raver119@gmail.com>
2020-04-30 11:22:25 +03:00
Alex Black cdea8be63a
Import fixes (#424)
* Import fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Import fix

Signed-off-by: Alex Black <blacka101@gmail.com>
2020-04-30 14:09:13 +10:00
Alex Black ffab4eec42
Fix SameDiff session termination condition when listener requests array after final requested output (#423)
* custom listener test

* abst session

Signed-off-by: eraly <susan.eraly@gmail.com>

* Partial fix

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix for execution termination condition

Signed-off-by: Alex Black <blacka101@gmail.com>

* Small error mesage improvement

Signed-off-by: Alex Black <blacka101@gmail.com>

Co-authored-by: eraly <susan.eraly@gmail.com>
2020-04-30 10:47:32 +10:00
Alex Black 88d3c4867f
Refactor packages to fix split package issues (#411)
* Refactor nd4j-common: org.nd4j.* -> org.nd4j.common.*

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix CUDA (missed nd4j-common package refactoring changes)

Signed-off-by: Alex Black <blacka101@gmail.com>

* nd4j-kryo: org.nd4j -> org.nd4j.kryo

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix nd4j-common for deeplearning4j-cuda

Signed-off-by: Alex Black <blacka101@gmail.com>

* nd4j-grppc-client: org.nd4j.graph -> org.nd4j.remote.grpc

Signed-off-by: Alex Black <blacka101@gmail.com>

* deeplearning4j-common: org.deeplearning4.* -> org.deeplearning4j.common.*

Signed-off-by: Alex Black <blacka101@gmail.com>

* deeplearning4j-core: org.deeplearning4j.* -> org.deeplearning.core.*

Signed-off-by: Alex Black <blacka101@gmail.com>

* deeplearning4j-cuda: org.deeplearning4j.nn.layers.* -> org.deeplearning4j.cuda.*

Signed-off-by: Alex Black <blacka101@gmail.com>

* Import fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* deeplearning4j-nlp-*: org.deeplearning4.text.* -> org.deeplearning4j.nlp.(language).*

Signed-off-by: Alex Black <blacka101@gmail.com>

* deeplearning4j-ui-model: org.deeplearning4j.ui -> org.deeplearning4j.ui.model

Signed-off-by: Alex Black <blacka101@gmail.com>

* datavec-spark-inference-{server/model/client}: org.datavec.spark.transform -> org.datavec.spark.inference.{server/model/client}

Signed-off-by: Alex Black <blacka101@gmail.com>

* datavec-jdbc: org.datavec.api -> org.datavec.jdbc

Signed-off-by: Alex Black <blacka101@gmail.com>

* Delete org.deeplearning4j.datasets.iterator.impl.MultiDataSetIteratorAdapter in favor of (essentially identical) org.nd4j.linalg.dataset.adapter.MultiDataSetIteratorAdapter

Signed-off-by: Alex Black <blacka101@gmail.com>

* ND4S fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* nd4j-common-tests: org.nd4j.* -> org.nd4j.common.tests

Signed-off-by: Alex Black <blacka101@gmail.com>

* Trigger CI

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* #8878 Ignore CUDA tests on modules with 'nd4j-native under cuda' issue

Signed-off-by: Alex Black <blacka101@gmail.com>

* Fix bad imports in tests

Signed-off-by: Alex Black <blacka101@gmail.com>

* Add ignore on test (already failing) due to #8882

Signed-off-by: Alex Black <blacka101@gmail.com>

* Import fixes

Signed-off-by: Alex Black <blacka101@gmail.com>

* Additional import fixes

Signed-off-by: Alex Black <blacka101@gmail.com>
2020-04-29 11:19:26 +10:00
raver119 bc8a9d1996
allocation of buffers backed by workspaces with 1 method call instead of 3 now (#420)
Signed-off-by: raver119@gmail.com <raver119@gmail.com>
2020-04-28 20:38:16 +03:00
Alex Black 1930d99908
Merge pull request #8892 from KonduitAI/master
Merge latest development work
2020-04-28 20:38:56 +10:00