63fa3c2ef3
libnd4j polishing ( #273 )
...
* initial set of include changes
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* one more tweak
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* few more rearrangements
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* few more rearrangements
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* few more rearrangements
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* cuda includes rearrangements
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* java update
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* = namespace changed to sd
- few CMake variables renamed with SD_ prefix
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* java update
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* LoopKind minor fix
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* few more changes
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* few more changes
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* few more changes
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* sanitizer is optional now
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* dev tests updated
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* few more changes
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* last update
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* java update
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2020-03-02 12:49:41 +03:00
29e8e09db6
String changes ( #3 )
...
* initial commit
* additional data types & tensor type
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* next step
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* missing include
* sparse_to_dense
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* few more tests files
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* draft
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* numeric sparse_to_dense
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* comment
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* string sparse_to_dense version
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* CUDA DataBuffer expand
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* few tweaks for CUDA build
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* shape fn for string_split
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* one more comment
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* string_split indices
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* next step
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* test passes
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* few rearrangements for databuffer implementations
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* DataBuffer: move inline methods to common implementations
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* add native DataBuffer to Nd4j presets
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* DataBuffer creation
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* use DataBuffer for allocation
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* cpu databuffer as deallocatable
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* DataBuffer setters for bufers
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* couple of wrappers
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* DataBuffers being passed around
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* Bunch of ByteBuffer-related signatures gone
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* - few more Nd4j signatures removed
- minor fix for bfloat16
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* nullptr pointer is still a pointer, but 0 as address :)
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* one special test
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* empty string array init
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* one more test in cpp
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* memcpy instead of databuffer swap
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* special InteropDataBuffer for front-end languages
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* few tweaks for java
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* pointer/indexer actualization
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* CustomOp returns list for inputArumgents and outputArguments instead of array
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* redundant call
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* print_variable op
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* - view handling (but wrong one)
- print_variable java wrapper
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* one more test
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* - empty arrays handling
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* - deserialization works now
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* minor fix
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* meh
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* one more fix
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* initial cuda commit
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* print_variable message validation
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* CUDA views
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* CUDA special buffer size
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* minor update to match master changes
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* - consider arrays always actual on device for CUDA
- additional PrintVariable constructor
- CudaUtf8Buffer now allocates host buffer by default
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* meh
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* - print_variable now allows print from device
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* InteropDataBuffer data type fix
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* ...
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* disable some debug messages
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* master pulled in
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* couple of new methods for DataBuffer interop
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* java side
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* offsetted constructor
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* new CUDA deallocator
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* CUDA backend torn apart
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* CUDA backend torn apart 2
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* CUDA backend torn apart 3
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* - few new tests
- few new methods for DataBuffer management
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* few more tests + few more tweaks
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* two failing tests
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* one more test
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* two failing tests pass
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* now we pass DataBuffer to legacy ops too
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* Native DataBuffer for legacy ops, Java side
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* CPU java side update
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* CUDA java side update
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* no more prepare/register action on java side
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* NDArray::prepare/register use now accepts vectors
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* InteropDataBuffer now has few more convenience methods
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* java bindings update
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* tick device in NativeOps
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* Corrected usage of OpaqueBuffer for tests.
* Corrected usage of OpaqueBuffer for java tests.
* NativeOpsTests fixes.
* print_variable now returns scalar
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* one more test
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* compat_string_split fix for CUDA
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* - CUDA execScalar fix
- CUDA lazyAllocateHostPointer now checks java indexer/pointer instead of native pointer
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* legacy ops DataBuffer migration prototype
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* ignore device shapeinfo coming from java
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* minor fix
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* minor transformAny fix
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* minor tweak for lazy host allocation
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* - DataBuffer::memcpy method
- bitcast now uses memcpy
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* - IndexReduce CUDA dimension buffer fix
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* views for CPU and CUDA
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* less spam
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* optional memory init
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* async memset
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* - SummaryStats CUDA fix
- DataBuffer.sameUnderlyingData() impl
- execBroadcast fix
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* - reduce3All fix
switch to CUDA 10 temporarily
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* CUDA version
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* proper memory deallocator registration
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* HOST_ONLY workspace allocation
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* temp commit
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* few conflicts resolved
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* few minor fixes
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* one more minor fix
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* NDArray permute should operate on JVM primitives
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* - create InteropDataBuffer for shapes as well
- update pointers after view creation in Java
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* - addressPointer temporary moved to C++
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* CUDA: don't account offset twice
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* CUDA: DataBuffer pointer constructor updated
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* CUDA NDArray.unsafeDuplication() simplified
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* CUDA minor workspace-related fixes
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* CPU DataBuffer.reallocate()
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* print_affinity op
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* print_affinity java side
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* CUDA more tweaks for data locality
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* - compat_string_split tweak
- CudaUtf8Buffer update
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* INDArray.close() mechanic restored
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* one more test fixed
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* - CUDA DataBuffer.reallocate() updated
- cudaMemcpy (synchronous) restored
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* one last fix
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* bad import removed
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* another small fix
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* one special test
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* fix bad databuffer size
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* release primaryBuffer on replace
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* higher timeout
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* disable timeouts
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* dbCreateView now validates offset and length of a view
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* additional validation for dbExpand
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* restore timeout back again
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* smaller distribution for rng test to prevent timeouts
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* CUDA DataBuffer::memcpy now copies to device all the time
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* OpaqueDataBuffer now contains all required methods for interop
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* some javadoc
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* GC on failed allocations
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* minoe memcpu tweak
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* one more bitcast test
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* - NDArray::deviceId() propagation
- special multi-threaded test for data locality checks
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* DataBuffer additional syncStream
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* DataBuffer additional syncStream
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* one ignored test
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* skip host alloc for empty arrays
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* ByteBuffer support is back
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* DataBuffer::memcpy minor fix
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* few minor prelu/bp tweaks
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* nullify-related fixes
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* PReLU fixes (#157 )
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* Build fixed
* Fix tests
* one more ByteBuffer signature restored
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* nd4j-jdbc-hsql profiles fix
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* nd4j-jdbc-hsql profiles fix
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* PReLU weight init fix
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* Small PReLU fix
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* - INDArray.migrate() reactivated
- DataBuffer::setDeviceId(...) added
- InteropDataBuffer Z syncToDevice added for views
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* missed file
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* Small tweak
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* cuda 10.2
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* minor fix
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Co-authored-by: shugeo <sgazeos@gmail.com>
Co-authored-by: Alex Black <blacka101@gmail.com>
Co-authored-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>
2020-01-04 13:27:50 +03:00
7abc574eeb
Snapshot update ( #8194 )
...
* fix double consumption of rng on cpu
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* Shyrma docs (#222 )
* - documenting and profiling matrix_set_diag cuda kernel
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* - correct formula of pnorm pooling in cuda 2d/3d kernels
- remove helper matrix_diag which duplicates work of helper matrix_set_diag
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* cublasHandle sharing + lock
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* cublasHandle sharing + lock
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* Documentation from serialization/deserialization in NLP (#221 )
* refactoring
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* Javadocs
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* Javadoc fixed
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* Cleanup
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* dedicated lock for getCudaCublasHandle
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* Small fixes (#223 )
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* ELU DL4J fixes (#224 )
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* javadoc (#225 )
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* Small test compilation fix (#226 )
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* #8182 remove spark version suffix (#227 )
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* [WIP] Thread safety (#229 )
* sync after cublas*gemm
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* mutex for CublasHelper
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* don't store cublasHandle in LaunchContext, it's per-device anyway
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* some printout
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* check for field instead
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* pew-pew
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* don't release ContextBuffers until device changed
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* small tweak
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* some logging in sgemm
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* stream sync
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* some more logging
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* some more error checks
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* one fancy test
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* one fancy test
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* minor AffinityManager fix
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* cudaEvent error logging improvement
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* ConstantHelper thread safety
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* - minor corrections in ConstantTadHelper
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* ConstantShapeHelper thread safety
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* ConstantTadHelper.cu updated
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* logging off
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* logging off
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2019-09-03 22:02:02 +03:00
25e5c23eae
[WIP] Error handling ( #169 )
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* CUDA reverse rewrite + couple of tests
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* don't throw exception on invalid pointer
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* data types validation for fastpath exec mode + 2 tests
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* data types validation for fastpath exec mode + 2 tests
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* ismax allowed dtypes tweak
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* lastErrorCode + lastErrorMessage for native exceptions handling
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* exportable ErrorReference
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* check error codes in java
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* - consume lastErrorCode
- fast_in dtype validation fix
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* - sg/cb allowed output type change
- minor logging fix for data type validation
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2019-08-26 19:57:51 +03:00
930b49e87f
[WIP] DeviceLocalNDArray updates ( #149 )
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* ContextBuffers are released upon device change
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* DeviceLocalNDArray updates + tests
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* special array for delayed mode
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* additional detach()
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2019-08-22 20:01:29 +03:00
3cf72e5e30
[WIP] More fixes ( #142 )
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* atomicAdd cc 70+
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* additional 8 bytes alocation
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* missed include 2019
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* less spam
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2019-08-21 20:18:29 +03:00
269d508ba5
[WIP] cross-device migrations ( #134 )
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* two more tests fixed
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* CUDA device afinity tweaks
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* minor tweaks
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* prepareAction/registerAction for CustomOps
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* lazy allocate host bufer before relocation
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* one special test for migration in cpp
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* tests update for msvc
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* logging
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* stick to old col2im impl
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* cudaStreams reorganization
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* buffer size fix
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* c++ data migration
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* fix CropAndResize test
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* - minor improvment
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2019-08-20 18:52:41 +03:00
53ca9a76e8
[WIP] multi-device support ( #80 )
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* fix pad javadoc and @see links. (#72 )
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* [WIP] More fixes (#73 )
* special tests for ConstantTadHelper/ConstantShapeHelper
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* release methods for data buffers
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* delete temporary buffer Java side
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* delete temporary buffer Java side
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* delete temporary TadPack C++/Java side (#74 )
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* Zoo model TF import test updates (#75 )
* argLine fix, update compression_gru comment
* updated comment for xception
* undid but commented argLine change
* updated xlnet comment
* copyright headers
* - new NDArray methods like()/ulike() (#77 )
- fix for depthwise_conv2d_bp + special test
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* upsampling2d fix CUDA
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* DL4J trace logging (#79 )
* MLN/CG trace logging for debugging
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* Tiny tweak
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* strided_slice_bp shape fn leak fix
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* SameDiff fixes and naming (#78 )
* remove SDVariable inplace methods
* import methods
* npe fix in OpVal
* removed SameDiff inplace ops from tests
* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything
* quick fixes
* javadoc
* SDVariable eval with placeholders
* use regex match
* better matching
* initial commit
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* initial commit
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* fix javadoc. (#76 )
* fix javadoc.
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* replace most @see with @link s.
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* 4 additional tests
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* launch context reorganization
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* LaunchContext reorganization
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* per-device LaunchContext
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* Various DL4J/ND4J fixes (#81 )
* #7954 Force refresh of UI when switching tabs on overview page
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* #8017 Concurrent modification exception (synchronize) fix
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* #8033 Don't initialize updater in middle of writing memory crash dump
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* #8208 Fix shape checks for ND4J int[] creator methods
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* #6385 #7992 Keras import naming fixes + cleanup
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* #8016 Upsampling3D - add NDHWC format support
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* ContextBuffers as separate entity
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* Refactor NativeOps.h to export C functions
* Actually export functions from NativeOps.h
* Adapt the Java wrappers in ND4J generated with JavaCPP
* Create C wrappers for some of the C++ classes currently used by ND4J
* ContextBuffers as separate entity
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* remove duplicate code in createBufferDetached. (#83 )
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* Keras model import - updater lr fix (#84 )
* Keras model import - updater lr fix
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* Keras model import - updater lr fix, cleanup
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* ContextBuffers as separate entity
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* ContextBuffers as separate entity
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* Fix functions of OpaqueVariablesSet
* thread-local buffers/affinity
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* thread safety for LaunchContext
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* more of thread safety
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* one more multi threaded test
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* SameDiff Convolution Config validation, better output methods (#82 )
* Conv Config validation & tests
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* stackOutputs utility method
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* use constructor for validation, support negative kernel sizes (infered from weights)
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* better output methods
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* move output to be with fit and evaluate
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* fixes
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* more fixes
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* refactor duplicate code from pad methods. (#86 )
* refactor duplicate code from pad methods.
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* replace switch with if.
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* Various ND4J/DL4J fixes and improvements (#87 )
* Reshape and reallocate - small fixes
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* Reshape and reallocate - small fixes
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* #6488 ElementWiseVertex broadcast support
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* Constructors and broadcast supported it Transforms.max/min
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* #8054 ElementWiseVertex now supports broadcast inputs
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* #8057 Nd4j.create overload dtype fix
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* #7551 ND4J Shape validation fix
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* [WIP] Numpy boolean import (#91 )
* numpy bool type
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* numpy bool java side
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* remove create method with unused parameter. (#89 )
* remove create method with unused parameter.
* removed more unused methods.
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* removing more unused code.
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* last removal of unused code.
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* remove createSparse methods. (#92 )
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* Various ND4J/DL4J fixes (#90 )
* Deprecate Old*Op instances
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* #8063 #8054 Broadcast exceptions + cleanup inplace ops
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* Small fix
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* Remove bad test condition
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* #7993 Fix shape function issue in crop_and_resize op
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* DL4J SameDiff lambda layer fix
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* #8029 Fix for pnorm backprop math
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* #8038 Fix Op profiler NaN/Inf triggering + add tests (#93 )
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* createUninitializedDetached refactoring. (#94 )
* wip
* update interface, add null implementations.
* Breaking one test in a weird way.
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* createUninitializedDetached refactored.
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* cuda build fix for issues introduced by recent refactoring
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* [WIP] More of CUDA (#95 )
* initial commit
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* Implementation of hashcode cuda helper. Working edition.
* Fixed parallel test input arangements.
* Fixed tests for hashcode op.
* Fixed shape calculation for image:crop_and_resize op and test.
* NativeOps tests. Initial test suite.
* Added tests for indexReduce methods.
* Added test on execBroadcast with NDArray as dimensions.
* Added test on execBroadcastBool with NDArray as dimensions.
* Added tests on execPairwiseTransform and execPairwiseTransofrmBool.
* Added tests for execReduce with scalar results.
* Added reduce tests for non-empty dims array.
* Added tests for reduce3.
* Added tests for execScalar.
* Added tests for execSummaryStats.
* - provide cpu/cuda code for batch_to_space
- testing it
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* - remove old test for batch_to_space (had wrong format and numbers were not checked)
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* Fixed complilation errors with test.
* Added test for execTransformFloat.
* Added test for execTransformSame.
* Added test for execTransformBool.
* Added test for execTransformStrict.
* Added tests for execScalar/execScalarBool with TADs.
* Added test for flatten.
* - provide cpu/cuda code for space_to_Batch operaion
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* Added test for concat.
* comment unnecessary stuff in s_t_b
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* Added test for specialConcat.
* Added tests for memcpy/set routines.
* Fixed pullRow cuda test.
* Added pullRow test.
* Added average test.
* - correct typo in NDArray::applyPairwiseTransform(nd4j::pairwise::BoolOps op...)
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* - debugging and fixing cuda tests in JavaInteropTests file
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* - correct some tests
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* Added test for shuffle.
* Fixed ops declarations.
* Restored omp and added shuffle test.
* Added convertTypes test.
* Added tests for execRandom. Eliminated usage of RandomBuffer with NativeOps.
* Added sort tests.
* Added tests for execCustomOp.
* - further debuging and fixing tests terminated with crash
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* Added tests for calculateOutputShapes.
* Addded Benchmarks test.
* Commented benchmark tests.
* change assertion
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* Added tests for apply_sgd op. Added cpu helper for that op.
* Implement cuda helper for aplly_sgd op. Fixed tests for NativeOps.
* Added test for assign broadcastable.
* Added tests for assign_bp op.
* Added tests for axpy op.
* - assign/execScalar/execTransformAny signature change
- minor test fix
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* Fixed axpy op.
* meh
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* - fix tests for nativeOps::concat
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* sequential transform/scalar
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* allow nested parallelism
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* assign_bp leak fix
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* block setRNG fix
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* enable parallelism by default
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* enable nested parallelism by default
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* Added cuda implementation for row_count helper.
* Added implementation for tnse gains op helper.
* - take into account possible situations when input arrays are empty in reduce_ cuda stuff
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* Implemented tsne/edge_forces op cuda-based helper. Parallelized cpu-based helper for edge_forces.
* Added kernel for tsne/symmetrized op heleper.
* Implementation of tsne/symmetrized op cuda helper. Working edition.
* Eliminated waste printfs.
* Added test for broadcastgradientargs op.
* host-only fallback for empty reduce float
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* - some tests fixes
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* - correct the rest of reduce_ stuff
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* - further correction of reduce_ stuff
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* Added test for Cbow op. Also added cuda implementation for cbow helpers.
* - improve code of stack operation for scalar case
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* - provide cuda kernel for gatherND operation
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* Implementation of cbow helpers with cuda kernels.
* minor tests tweaks
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* minor tests tweaks
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* - further correction of cuda stuff
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* Implementatation of cbow op helper with cuda kernels. Working edition.
* Skip random testing for cudablas case.
* lstmBlockCell context fix
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* Added tests for ELU and ELU_BP ops.
* Added tests for eq_scalar, gt_scalar, gte_scalar and lte_scalar ops.
* Added tests for neq_scalar.
* Added test for noop.
* - further work on clipbynorm_bp
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* - get rid of concat op call, use instead direct concat helper call
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* lstmBlockCell context fix
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* Added tests for lrelu and lrelu_bp.
* Added tests for selu and selu_bp.
* Fixed lrelu derivative helpers.
* - some corrections in lstm
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* operator * result shape fix
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* - correct typo in lstmCell
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* few tests fixed
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* CUDA inverse broadcast bool fix
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* disable MMAP test for CUDA
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* BooleanOp syncToDevice
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* meh
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* additional data types for im2col/col2im
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* Added test for firas_sparse op.
* one more RandomBuffer test excluded
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* Added tests for flatten op.
* Added test for Floor op.
* bunch of tests fixed
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* mmulDot tests fixed
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* more tests fixed
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* Implemented floordiv_bp op and tests.
* Fixed scalar case with cuda implementation for bds.
* - work on cuda kernel for clip_by_norm backprop op is completed
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* Eliminate cbow crach.
* more tests fixed
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* more tests fixed
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* Eliminated abortion with batched nlp test.
* more tests fixed
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* Fixed shared flag initializing.
* disabled bunch of cpu workspaces tests
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* scalar operators fix: missing registerSpecialUse call
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* Fixed logdet for cuda and tests.
* - correct clipBynorm_bp
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* Fixed crop_and_resize shape datatype.
* - correct some mmul tests
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* build fix
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* exclude two methods for JNI
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* exclude two methods for JNI
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* exclude two methods for JNI (#97 )
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* temporary stack fix
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* round robin affinity test
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* get rid of legacy CudaContext methods
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* get rid of legacy ContextPool classes/methods
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* one legacy test removed
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* few more fields rearranged
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* OpaqueLaunchContext
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* OpaqueLaunchContext++
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* more of OpaqueLaunchContext methods
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* LaunchContext -> CudaContext
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* AffinityManger changes
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* AffinityManger changes
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* cusolver handles
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* typo
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* cusolver method
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* cusolver handle propagated
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* blas/solver handles
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* one more test
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* legacy concat implementations replaced with new CustomOp
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* one more test
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* concat now uses way more blocks
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* print
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* no more triple template mmul
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* bunch of kernels have dtypes reconsidered
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* bunch of kernels have dtypes reconsidered
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* bitonic sort reorganized
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* bunch of cpu stuff removed from cuda scope
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* bunch of cpu stuff removed from cuda scope
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* type conversions moved to generic impl
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* cpu data types pass
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* non_max_suppression
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* sortByValue fix
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* ignore all mixed datatype tests for mmul
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* special handling of OpProfiler exceptions
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* - one failing concat test in cpp
- Nd4j.tile now uses op internally
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* get back dtype exception for legacy arrays deserialization
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2019-08-14 16:52:34 +03:00
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