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Author SHA1 Message Date
Alexander Stoyakin f31661e13b
Merge pull request #7 from KonduitAI/asto_nd4s_10172019 
KDTree optimization
 2019-10-23 12:11:25 +03:00
Alexander Stoyakin 9e5799847a TF names fixed. 2019-10-16 19:50:18 +03:00
Alexander Stoyakin 502bedf5d5 Register ops for TF import. 2019-10-16 19:39:04 +03:00
Alexander Stoyakin ec722b20ee TF names added 2019-10-16 19:29:19 +03:00
Alexander Stoyakin 99d77e1384 Ops exported for sameDiff 2019-10-16 19:16:47 +03:00
Alexander Stoyakin d5002b14c7 New ops wrappers 2019-10-16 12:59:08 +03:00
Alex Black b9a4b0f25f
Update links (#8292) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-10-16 12:59:52 +11:00
Robert Altena 50b13fadc8 nd4j-api cleanup. (#8273) 
* nd4j-api cleanup.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* restore deleted schemes.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-10-08 21:48:22 +11:00
Robert Altena 1f4ad08305 refactoring activations. (#8261) 
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-10-03 20:35:27 +10:00
Alex Black f98f8be7b6
SameDiff ops (#8247) 
* update javadocs and a few method signatures

Signed-off-by: Ryan Nett <rnett@skymind.io>

* add PRelu op

Signed-off-by: Ryan Nett <rnett@skymind.io>

* test and fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* add PRelu op

Signed-off-by: Ryan Nett <rnett@skymind.io>

* test and fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* slightly better test

Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-09-19 11:52:20 +10:00
Steven Lang d58a4b45b1 Fix Nadam updater clone missing schedule (#8243) 
Signed-off-by: Steven Lang <steven.lang.mz@gmail.com>
 2019-09-17 22:56:49 +03:00
Robert Altena 83d958d536 Sparse matrix refactoring. (#8238) 
* remove sparse method from INDArray.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove gemm

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove useage of n4j.sparseFactory

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Nd4j.sparseFactory removed.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* sparseNDArray deleted.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* iremove more sparse calls and constants.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove SparseBlasWrapper.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* delete BaseSparseBlaswrapper.

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* remove 3 sparse factory classes.

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* delete SparseCPULevel.

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* deletes JcusparseLevel, CUDASparselevel.

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* delete nativeCPU sparse classes.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* removes sparse methods from NDArrayFactory.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* more deletes.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* delete (ignored) tests. BaseSparseNDArray.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* deletes ISparseNDArray.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove sparse methods from indArray.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* deletes sparse classes.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-09-17 22:56:29 +03:00
raver119 979ef13c0b fix build issues 
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 2019-09-13 11:55:13 +03:00
raver119 2bd69c004c
[WIP] Fixed signatures. SameDiff tests (#258) (#8233) 
* Fixed signatures. SameDiff tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Tests fixed

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* Test fixed

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* Small fix

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* Fixed test

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 2019-09-12 19:25:03 +03:00
AlexDBlack a66e03355e Merge remote-tracking branch 'fork/master' 2019-09-12 12:20:57 +10:00
raver119 07901ceb69 few more mkldnn dependencies removed 
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 2019-09-12 04:55:59 +03:00
raver119 98e2814879
Platform helpers (#8216) 
* platform helpers draft

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* typo

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* disable platform cmake

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* another draft

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* mkldnn convolution refactored

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* minor tweaks

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* one more safety check

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* prototype works

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* meh

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* force static library mode for mkldnn

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* - ismax fix
- experimental arg fix
- don't enforce openblas on Apple hardware

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* bunch of small fixes

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* declare concurrent

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* - MKLDNN version upgrade to 1.0.2
- avgpool2d/maxpool2d APIs update

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* - avgpool2d_bp/maxpool2d_bp APIs update

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* - conv2d/batchnorm APIs update

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* - lrn/conv2d_bp/conv3d/conv3d_bp APIs update

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* all ops converted to MKLDNN 1.x

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* bunch of tweaks

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* namespace for platform helpers

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* make sure platform helpers aren't opimized out

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* build cpu_features on x86 systems

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* build cpu_features on x86 systems

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* more of cpu_features

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* - mkldnn removed from java
- cpu_features checks in CpuNDArrayFactory

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* F16C definition renamed

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* some mkldnn rearrangements

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* check supported instructions before doing anything

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* typo

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* missied impl

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* BUILD_PIC option

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* conv2d fix

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* avgpool3d fix

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* avgpool3d_bp fix

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* avgpool2d_bp leak fix

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* avgpool3d_bp leak fix

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* maxpool bp leaks fixed

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* printf removed

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* batchnorm fix

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* AVX warning/error polishing

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* Fix

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* More polish

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* Polish

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* remove previous MKL-DNN support layer

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* avx2 tweak

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* allow static for apple

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* exclude mkldnn in one more place

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* exclude mkldnn in one more place

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* restore OPENBLAS_PATH use

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* add runtime check for avx/avx2 support

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* convolution_auto

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* Add logic for helper argument

* minor test fix

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* few tweaks

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* few tweaks

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* skip OpTracker props for non-x86 builds

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* linux arm isn't x86 :)

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* avx-512

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* CUDA presets fix

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* BUILD_PIC

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* prefetchw for avx2

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* BUILD_PIC again

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 2019-09-11 21:50:28 +03:00
Alex Black 3e73e9b56e
Fixes, cleanup, enable now fixed tests, etc (#254) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-11 23:37:24 +10:00
Ryan Nett 8a05ec2a97
Fix a couple SameDiff training issues (#253) 
* fix execBackwards training issue

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix validation not specifying outputs

Signed-off-by: Ryan Nett <rnett@skymind.io>

* another fix for validation listeners and history

Signed-off-by: Ryan Nett <rnett@skymind.io>

* tests

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* add single batch dataset output methods

Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-09-10 20:38:23 -07:00
Alex Black 4f7b35ac82
Update links to eclipse repos (#252) 
* Fix repo links and clean up old github templates

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More link updates

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-10 19:09:46 +10:00
Alex Black f91970734b
Another small fix (#251) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-10 13:14:29 +10:00
Alex Black 3fb9aecb59
Fix for null shape in SameDiff.var validation (#250) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-10 12:22:10 +10:00
Alex Black b582e69e3b
Small ND4J/SameDiff fixes (#248) 
* #8218 Fix Nd4j.hstack rank 1 case

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8209 SameDiff: don't allow empty arrays (with 0s in shape) for variables

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 2019-09-09 22:54:07 +10:00
Robert Altena c99f980513 INDArray javadoc (#246) 
* javadoc

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* javadoc

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* javadoc

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* review fixes.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-09-09 13:09:31 +10:00
AlexDBlack a76a44e198 Merge remote-tracking branch 'fork/master' 2019-09-05 22:04:25 +10:00
Alex Black 52d2795193
Another round of small fixes (#241) 
* Small base spark test fix; ROC toString for empty ROC

Signed-off-by: Alex Black <blacka101@gmail.com>

* More fixes

Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-09-05 17:01:47 +10:00
Alex Black 87d873929f
Small LapackTest fix (#240) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-05 14:25:20 +10:00
Ryan Nett 79867f5c5a cleanup SDRNN and rnn ops (#238) 
Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-09-05 12:25:03 +10:00
Alex Black 7d85775934
Arbiter generic JSON ser/de fixes (#237) 
* Arbiter generic JSON ser/de fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Javadoc fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-05 11:51:11 +10:00
Robert Altena f25e3e71e5 remove lengthLong (#236) 
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-09-05 11:19:38 +10:00
AlexDBlack b7226bdd7a Merge 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-05 00:54:11 +10:00
Alex Black 03c52ef9dd
Add SameDiff.bitwise namespace (#232) 
* #8196 add SameDiff.bitwise namespace

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Add BitsHammingDistance, add remaining bitwise ops to bitwise namespace

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* fix

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 2019-09-04 22:34:31 +10:00
raver119 a90c7dd995
[WIP] Last set of changes (#234) 
* mmul op instead of cublasSgemm

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* transB

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* jcpp handles

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* bitwise and/or/xor

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* bitwise and/or/xor mapping

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* cuda/cublas version check

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* add expected version

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* cuda/cublas version check in java

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* one more error check

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* build fix

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* build fix

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* build fix

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* one more fix

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* skip CUDA version check for now

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* better wording

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* few more tweaks

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* few more tweaks

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 2019-09-04 14:41:08 +03:00
Ryan Nett e9454b8882
SDCNN cleanup pass (#230) 
* SDCNN cleanup

Signed-off-by: Ryan Nett <rnett@skymind.io>

* NonNull annotations

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* better javadoc, NonNull fix for sconv

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* update builders to fix names

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* fixes

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* even more fixes

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* fix for null bias

Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-09-04 00:44:01 -07:00
Alex Black 6cc887bee9
Rename flatbuffers DataType to DType (#228) 
* Rename flatbuffers DataType enum to DType

Signed-off-by: Alex Black <blacka101@gmail.com>

* Rename flatbuffers DataType enum to DType

Signed-off-by: Alex Black <blacka101@gmail.com>

* Updates for flatbuffers datatype enum renaming

Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-09-04 16:36:11 +10:00
Robert Altena 25b01f7850 javadoc and remove deprecated methods. (#231) 
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-09-04 13:29:02 +10:00
raver119 7abc574eeb
Snapshot update (#8194) 
* fix double consumption of rng on cpu

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* Shyrma docs (#222)

* - documenting and profiling matrix_set_diag cuda kernel

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* - correct formula of pnorm pooling in cuda 2d/3d kernels
- remove helper matrix_diag which duplicates work of helper matrix_set_diag

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* cublasHandle sharing + lock

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* cublasHandle sharing + lock

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* Documentation from serialization/deserialization in NLP (#221)

* refactoring

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* Javadocs

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* Javadoc fixed

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* Cleanup

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* dedicated lock for getCudaCublasHandle

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* Small fixes (#223)

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* ELU DL4J fixes (#224)

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* javadoc (#225)

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* Small test compilation fix (#226)

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* #8182 remove spark version suffix (#227)

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* [WIP] Thread safety (#229)

* sync after cublas*gemm

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* mutex for CublasHelper

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* don't store cublasHandle in LaunchContext, it's per-device anyway

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* some printout

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* check for field instead

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* pew-pew

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* don't release ContextBuffers until device changed

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* small tweak

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* some logging in sgemm

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* stream sync

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* some more logging

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* some more error checks

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* one fancy test

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* one fancy test

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* minor AffinityManager fix

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* cudaEvent error logging improvement

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* ConstantHelper thread safety

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* - minor corrections in ConstantTadHelper

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* ConstantShapeHelper thread safety

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* ConstantTadHelper.cu updated

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* logging off

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* logging off

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 2019-09-03 22:02:02 +03:00
raver119 dddc8a1143
[WIP] Thread safety (#229) 
* sync after cublas*gemm

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* mutex for CublasHelper

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* don't store cublasHandle in LaunchContext, it's per-device anyway

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* some printout

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* check for field instead

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* pew-pew

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* don't release ContextBuffers until device changed

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* small tweak

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* some logging in sgemm

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* stream sync

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* some more logging

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* some more error checks

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* one fancy test

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* one fancy test

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* minor AffinityManager fix

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* cudaEvent error logging improvement

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* ConstantHelper thread safety

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* - minor corrections in ConstantTadHelper

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* ConstantShapeHelper thread safety

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* ConstantTadHelper.cu updated

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* logging off

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* logging off

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 2019-09-03 22:00:38 +03:00
Robert Altena c64b340975 javadoc (#225) 
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-09-03 14:06:42 +10:00
Alex Black 364a6e1a2a
ELU DL4J fixes (#224) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-03 13:35:02 +10:00
raver119 d3253aff3f dedicated lock for getCudaCublasHandle 
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 2019-09-02 20:01:13 +03:00
raver119 2129d5bcac cublasHandle sharing + lock 
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 2019-09-02 16:52:28 +03:00
raver119 18828f9725 cublasHandle sharing + lock 
Signed-off-by: raver119 <raver119@gmail.com>
 2019-09-02 16:52:10 +03:00
AlexDBlack 7ded4416cb Merge remote-tracking branch 'fork/master' 2019-09-02 18:52:12 +10:00
Alex Black 82c9dc5743
ELU fix (#219) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-02 18:37:05 +10:00
Alex Black 65c9f2a888
ELU fix (#217) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-09-02 17:42:12 +10:00
Ryan Nett b3a134b608 New Nd4j backprop ops for activations (#211) 
* new (for java at least) backprop ops

Signed-off-by: Ryan Nett <rnett@skymind.io>

* update activation functions

Signed-off-by: Ryan Nett <rnett@skymind.io>

* add differential functions for SameDiff

Signed-off-by: Ryan Nett <rnett@skymind.io>

* deprecate old ops

Signed-off-by: Ryan Nett <rnett@skymind.io>

* update correct old ops

Signed-off-by: Ryan Nett <rnett@skymind.io>

* update ops backprop to use new ops

Signed-off-by: Ryan Nett <rnett@skymind.io>

* misc updates for deprecated functions (mostly Nd4j.rand w/ vararg shape)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove old imports

Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-09-02 16:15:23 +10:00
Robert Altena 6d04d30c94 INDArray.java javadoc (#215) 
* javadoc

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* javadoc

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-09-02 16:06:20 +10:00
Robert Altena ef1de6a4aa rcorbish #8617 (#8188) 
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-09-01 07:17:36 +03:00
raver119 b71c993ded
[WIP] maxpool_bp cuda fix (#212) 
* one test for alex

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* fix

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* get rid of safety offset in cpp

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* bfloat16

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* minor test rearrangement to fastpath launch

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* - atomicAdd/Mul/Div fix for float16/bfloat16 misalignment
- one special test for maxpoolbp java
- safety offset of 8 bytes is back to libnd4j legacy

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-31 20:57:05 +03:00
Alex Black 6efffb727f
Import fix (#208) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-30 23:40:52 +10:00
Alex Black a7dca9fc87
Add java op class for relu derivative, and use in Activation ReLU (#207) 
* Add java op class for relu derivative, and use in ACtivation ReLU

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* Fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-30 23:36:00 +10:00
raver119 70a9ae5068
[WIP] few tweaks (#206) 
* scatter empty check

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* scatter empty test

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* one more test

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* two tweaks

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* dup tweak

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* - put empty checking of indices array immediately prior  helper run

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* minor tests fix

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* minor tests fix

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 2019-08-30 16:32:01 +03:00
Robert Altena 54e320a255 javadoc (#201) 
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-08-30 22:40:27 +10:00
Alex Black 62e96c9724
Guava Function -> nd4j-common Function (#203) 
Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-08-30 20:39:43 +10:00
raver119 1003428a18
[WIP] Int broadcastables (#195) 
* Removed invalid resource and fixed tests

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* legacy scalar/pairwise/broadcast int ops

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* NDArray int broadcastables

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* few more bitwise tests

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* java side update

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* Argument type changed for shift ops

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* legacy scalar/pairwise/broadcast int ops

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* NDArray int broadcastables

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* few more bitwise tests

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* java side update

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* Argument type changed for shift ops

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>
 2019-08-30 10:12:40 +03:00
Alex Black 130c9aa536
Fixes (#202) 
* Remove unnecessary dup in MKLDNNSubsamplingHelper

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* gson dep fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-30 16:36:14 +10:00
Alex Black dcc2baa676
Version upgrades (#199) 
* DataVec fixes for Jackson version upgrade

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J jackson updates + databind version 2.9.9.3

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Shade snakeyaml along with jackson

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* Version fix

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* Switch DataVec legacy JSON format handling to mixins

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* Next set of fixes

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* Cleanup for legacy JSON mapping

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* Upgrade commons compress to 1.18; small test fix

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* New Jackson backward compatibility for DL4J - Round 1

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* New Jackson backward compatibility for DL4J - Round 2

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* More fixes, all but legacy custom passing

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* Provide an upgrade path for custom layers for models in pre-1.0.0-beta JSON format

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* Legacy deserialization cleanup

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* Small amount of polish - legacy JSON

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* Upgrade guava version

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* IEvaluation legacy format deserialization fix

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* Upgrade play version to 2.7.3

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* Update nd4j-parameter-server-status to new Play API

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* Update DL4J UI for new play version

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* More play framework updates

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* Small fixes

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* Remove Spark 1/2 adapter code from DataVec

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* datavec-spark dependency cleanup

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* DL4J spark updates, pt 1

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* DL4J spark updates, pt 2

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* DL4J spark updates, pt 3

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* DL4J spark updates, pt 4

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* Test fix

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* Another fix

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* Breeze upgrade, dependency cleanup

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* Add Scala 2.12 version to pom.xml

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* change-scala-versions.sh - add scala 2.12, remove 2.10

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Move Spark version properties to parent pom (now that only one spark version is supported)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DataVec Play fixes

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* datavec play dependency fixes

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* Clean up old spark/jackson stuff

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Cleanup jackson unused dependencies

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Dropping redundant dependency

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Removed scalaxy dependency

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* DataVec fixes for Jackson version upgrade

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J jackson updates + databind version 2.9.9.3

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Shade snakeyaml along with jackson

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Version fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Switch DataVec legacy JSON format handling to mixins

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Next set of fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Cleanup for legacy JSON mapping

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Upgrade commons compress to 1.18; small test fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* New Jackson backward compatibility for DL4J - Round 1

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* New Jackson backward compatibility for DL4J - Round 2

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More fixes, all but legacy custom passing

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Provide an upgrade path for custom layers for models in pre-1.0.0-beta JSON format

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Legacy deserialization cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small amount of polish - legacy JSON

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Upgrade guava version

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* IEvaluation legacy format deserialization fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Upgrade play version to 2.7.3

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Update nd4j-parameter-server-status to new Play API

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Update DL4J UI for new play version

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* More play framework updates

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Remove Spark 1/2 adapter code from DataVec

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* datavec-spark dependency cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J spark updates, pt 1

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* DL4J spark updates, pt 2

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* DL4J spark updates, pt 3

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* DL4J spark updates, pt 4

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* Test fix

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* Another fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Breeze upgrade, dependency cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Add Scala 2.12 version to pom.xml

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* change-scala-versions.sh - add scala 2.12, remove 2.10

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Move Spark version properties to parent pom (now that only one spark version is supported)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DataVec Play fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* datavec play dependency fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Clean up old spark/jackson stuff

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Cleanup jackson unused dependencies

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Add shaded guava

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Dropping redundant dependency

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Removed scalaxy dependency

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Ensure not possible to import pre-shaded classes, and remove direct guava dependencies in favor of shaded

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* ND4J Shaded guava import fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DataVec and DL4J guava shading

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Arbiter, RL4J fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Build fixed

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Fix dependency

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Fix bad merge

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Jackson shading fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Set play secret, datavec-spark-inference-server

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Fix for datavec-spark-inference-server

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Arbiter fixes

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* Arbiter fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small test fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-30 14:35:27 +10:00
Serhii Shepel 0463ee4eba Fix backend dependencies for tests (#189) 2019-08-29 12:54:48 +09:00
Yurii Shyrma 70af8c2afc Shyrma svd (#191) 
* - add one additional test for svd

* - provide float argument in eye op to be a type of output array

Signed-off-by: Yurii <yurii@skymind.io>

* - add cuda capability check to mmulHelper

Signed-off-by: Yurii <yurii@skymind.io>

* - make use another method for divice id evaluation

Signed-off-by: Yurii <yurii@skymind.io>

* Eye data type as T argument

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-28 18:27:08 +03:00
raver119 f4860574d7
[WIP] More fixes (#190) 
* Refactored kernels for segment_max/min/sum ops.

* Refactored segment_prod kernels.

* Refactored segment_prod kernels.

* DynamicPartition test

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* Addede linear test for dynamic_partition op.

* Refactored test with int datatype.

* some logging

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* some logging

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* some logging

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* dynamicPartition fix

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* get rid of some logging

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* one more test for dynamic_stitch

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* one more test for dynamic_stitch

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* empty check for stitch

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* minor print changes

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-28 15:38:57 +03:00
Ryan Nett 2a1431264f
Remove calculate output shape from java side (#151) 
* remove some unneeded java-side output shape calculations

Signed-off-by: Ryan Nett <rnett@skymind.io>

* delete Broadcast

Signed-off-by: Ryan Nett <rnett@skymind.io>

* delete Linear and Module,

Signed-off-by: Ryan Nett <rnett@skymind.io>

* update Identity, HashCode, and NoOp

Signed-off-by: Ryan Nett <rnett@skymind.io>

* removed Cast java-side shape function, added tests and SDVariable.isEmpty

Signed-off-by: Ryan Nett <rnett@skymind.io>

* ignoring test w/ issues on master

Signed-off-by: Ryan Nett <rnett@skymind.io>

* noop needs more work, fixed BaseArithmeticBackprop and BaseDynamicTransform ops

merge in master for c++ build fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix EqualTo

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix other cond ops

Signed-off-by: Ryan Nett <rnett@skymind.io>

* "fake" ops calculateOutputShape() throws exception

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* use c++ shape calc for Linspace

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix exception message, move most to BaseCompatOp

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove SDVariable.isEmpty

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove commented out code

Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-08-27 20:39:32 -07:00
Alex Black b46f9827b8
Layer norm test updates (#187) 
Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-08-28 13:27:00 +10:00
Robert Altena 59a6e4e3ae
INDArray refactoring (#170) 
* javadoc

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove javaTensorAlongDimension

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* javadoc
 2019-08-28 12:03:23 +09:00
Ryan Nett d31197db5f Remove resolvePropertiesFromSameDiffBeforeExecution() (#172) 
* remove unneeded resolveProperties methods

Signed-off-by: Ryan Nett <rnett@skymind.io>

* final fixes, make final to prevent more from being added

Signed-off-by: Ryan Nett <rnett@skymind.io>

* gather fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* deprecate DifferentialFunction resolveProps

Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-08-28 11:02:41 +10:00
raver119 b472d7d8c8
[WIP] few more fixes (#182) 
* one noop test

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* skip input validation for no-input ops

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* - one more noop empty test
- one more validation before sync

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* typo

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* one more validation fix

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* CUDA empty reductions java side

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* one svd test

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* Corrected segment_mean helpers and added another test.

* Refactored segment_mean kernels to avoid race_condition.
 2019-08-27 21:00:38 +03:00
Alex Black 9d325ad070
Small optimization to Nd4j.readNumpy (#183) 
Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-08-27 23:27:41 +10:00
Alex Black dff599aa8f
Test fix (#179) 
Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-08-27 20:43:36 +10:00
raver119 a49f7c908b
[WIP] More fixes (#178) 
* skip string arrays for device validation

Signed-off-by: raver119 <raver119@gmail.com>

* histogram_fixed_width now really supports indexing types

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-27 13:21:01 +03:00
Alex Black fd22a8ecc7
Small build fix, after last PR (#177) 
Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-08-27 19:46:26 +10:00
Alex Black 5cfbeb64ac
Another small fix (#175) 
* Layer norm 4d case fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-27 19:10:31 +10:00
Alex Black dce4751fc1
Layer norm 4d case fixes (#174) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-27 18:34:53 +10:00
raver119 05d45ec050 IndexReduce along dim CUDA fix 
Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-27 11:31:59 +03:00
raver119 df84bc7255
[WIP] More tweaks (#173) 
* CUDA empty reduction

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* - listdiff synchronization fix for CUDA
- listdiff test

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* - IndexReduce ops now allow INDEXING_TYPES output
- topK op accepts only INDEXING_TYPES as output

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-27 10:37:10 +03:00
Alex Black e92f7218f3
Add new tests (#171) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-27 12:15:56 +10:00
raver119 25e5c23eae
[WIP] Error handling (#169) 
* CUDA reverse rewrite + couple of tests

Signed-off-by: raver119 <raver119@gmail.com>

* don't throw exception on invalid pointer

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* data types validation for fastpath exec mode + 2 tests

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* data types validation for fastpath exec mode + 2 tests

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* ismax allowed dtypes tweak

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* lastErrorCode + lastErrorMessage for native exceptions handling

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* exportable ErrorReference

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* check error codes in java

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* - consume lastErrorCode
- fast_in dtype validation fix

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* - sg/cb allowed output type change
- minor logging fix for data type validation

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-26 19:57:51 +03:00
raver119 bb5fc36e5e
[WIP] ops fixes (#168) 
* - correct layer_norm

Signed-off-by: Yurii <yurii@skymind.io>

* - further fix of layer norm

Signed-off-by: Yurii <yurii@skymind.io>

* - correct scatter_upd op

Signed-off-by: Yurii <yurii@skymind.io>

* - correct cuda kernel for histogram_fixed_width op

Signed-off-by: Yurii <yurii@skymind.io>

* - delete comments

Signed-off-by: Yurii <yurii@skymind.io>

* enabled one ignored test

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-26 19:37:05 +03:00
Alex Black b417ca21bf
Fix for concat op shape function (empty shapes) (#167) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-26 23:10:28 +10:00
Robert Altena 9a513a9aa6
INDArray javadocs (#166) 
* small fix of compiler warnings in nd4j.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* indarray javadoc start.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-08-26 16:01:20 +09:00
Alex Black d607bec6f9
Small test fixes (#165) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-26 11:45:33 +10:00
Alex Black a9b08cc163
Upgrade protobuf version (#162) 
* First steps for protobuf version upgrade

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Phase 2

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Update imports to shaded protobuf

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Version fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Switch to single execution for protobuf codegen to work around plugin bug

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Automatically delete old PB generated files after name change

Signed-off-by: Alex Black <blacka101@gmail.com>
 2019-08-24 19:22:36 +10:00
raver119 f8364997c0
[WIP] maxpool2d_bp fix (#160) 
* one test for maxpool2d_bp

Signed-off-by: raver119 <raver119@gmail.com>

* - maxpool2d_bp cuda fix for NaNs
- streamSync after each custom op execution

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-24 09:20:57 +03:00
raver119 f03b0ee78f
[WIP] more fixes (#159) 
* Added test for MatrixInverse with double input. Fixed matrixDeterminantKernel.

* Fixed kernels to avoid waste templating.

* Fixed logDeterminant kernel.

* Refactored type check for lup'

* - decrease blockDim value for zeta op

Signed-off-by: Yurii <yurii@skymind.io>

* Added print for compound matrix with CUDA.

* Refactored upper matrix invertion kernels.

* - provide move constructor and move assignment operator for OpArgsHoder class

Signed-off-by: Yurii <yurii@skymind.io>

* Refactored usage of launch context.

* - add test for mergemax

Signed-off-by: Yurii <yurii@skymind.io>

* get rid of AveragingArrayProxy

Signed-off-by: raver119 <raver119@gmail.com>

* Refactoring of LUP inversion.

* Added prints for invertion.

* - add OpArgsHolder copy constructor and assignment operator

Signed-off-by: Yurii <yurii@skymind.io>

* Added test for lower inversion

* - fix bug in upsampling2d/3d_bp op

Signed-off-by: Yurii <yurii@skymind.io>

* Added expensive printfs to kernel.

* Refactored expensive kernel prints.

* Refactored expensive printfs

* - remove nullify

Signed-off-by: Yurii <yurii@skymind.io>

* Eliminated waste prints with tests.

* upsampling2d_bp test

Signed-off-by: raver119 <raver119@gmail.com>

* test updated

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-23 19:20:50 +03:00
raver119 99cdf6d42b - cpu isMax fix for multidim case + test 
- INDArray.wasClosed() fix for empty array edge case

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-23 18:44:37 +03:00
Alexander Stoyakin 2e99bc2dee [WIP] Handling binary data in DL4J servlet (#135) 
* Binary deser

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Binary mode for servlet

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Added test

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* -sRandom image generation copied from datavec

* -sRandom image generation copied from datavec

* Remove serialization constraints

* Fix:

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Removed unused code

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Resources usage

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Async inference

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Cleanup

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* -sTest corrected

* Cleanup

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Mutually eclusive serializers/deserializers

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Binary output supported

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* Binary out test

Signed-off-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>

* - types hardcoded
- increased payload size limit

Signed-off-by: raver119 <raver119@gmail.com>

* change types constant

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-23 17:00:55 +03:00
Alex Black 70ee8ba91d
Optimization / fix for DL4J SameDiff layers (#156) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-23 20:54:24 +10:00
raver119 729dc5e879
[WIP] size etc (#155) 
* one test for size

Signed-off-by: raver119 <raver119@gmail.com>

* - few tests for size op
- size/rank/size_at ops now use p instead of assign

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-23 12:31:12 +03:00
Samuel Audet c4e7d032cb ND4J: Fix incorrectly bundled libraries on Linux ARM 
Signed-off-by: Samuel Audet <samuel.audet@gmail.com>
 2019-08-23 16:54:54 +09:00
raver119 dbea687903
better handling of INDArray.close() (#154) 
Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-23 10:24:56 +03:00
raver119 243bf866c4
[WIP] Few fixes (#153) 
* throw exception if op execution failed

Signed-off-by: raver119 <raver119@gmail.com>

* expected for test

Signed-off-by: raver119 <raver119@gmail.com>

* one more ismax test

Signed-off-by: raver119 <raver119@gmail.com>

* ismax view fix

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-23 09:00:10 +03:00
Alex Black 80d35377d4
SameDiff cleanup and fixes (#150) 
* Cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* SDVariable no longer extends DifferentialFunction

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8123 Remove cloning library to avoid 'illegal reflective access' warnings

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8095 Make Pooling3D abstract, fix flatbuffers serialization issue

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8117 WordVectorSerializer deprecated method javadoc

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Final fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* One more

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-23 15:09:53 +10:00
raver119 930b49e87f
[WIP] DeviceLocalNDArray updates (#149) 
* ContextBuffers are released upon device change

Signed-off-by: raver119 <raver119@gmail.com>

* DeviceLocalNDArray updates + tests

Signed-off-by: raver119 <raver119@gmail.com>

* special array for delayed mode

Signed-off-by: raver119 <raver119@gmail.com>

* additional detach()

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-22 20:01:29 +03:00
Robert Altena c523aa792f
removr trueVector. (#146) 
Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-08-22 19:27:43 +09:00
Alex Black 9c2bfc9863
Various fixes (DL4J, ND4J) (#147) 
* Import fixes, IsMax dtype calc, small test fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* SubsamplingLayer fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J - SpaceToBatch layer updates

Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-22 16:16:03 +10:00
Robert Altena ca7e5593ec
ND4J: Remove Nd4j.trueScalar/trueVector (#145) 
* merge conflict.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* remove/replace trueVector

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* wip

Signed-off-by: Robert Altena <Rob@Ra-ai.com>
 2019-08-22 10:49:30 +09:00
Ryan Nett 2b0d7b3b52
[WIP] Various fixes, mostly SameDiff/Nd4j (#110) 
* Nd4j pad update

Signed-off-by: Ryan Nett <rnett@skymind.io>

* switched from guava Immutables to Collections.unmodifiableList/Map

Signed-off-by: Ryan Nett <rnett@skymind.io>

* javadoc

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use new pad

Signed-off-by: Ryan Nett <rnett@skymind.io>

* conv tests use OpValidation

Signed-off-by: Ryan Nett <rnett@skymind.io>

* deconv3d overrides

Signed-off-by: Ryan Nett <rnett@skymind.io>

* test fix for the new pad method

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more test fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more test fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* rename SameDiff function methods to op (except for the actual SameDiff function ones)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more pad overloads, test fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* test updates

Signed-off-by: Ryan Nett <rnett@skymind.io>

* conv1d test

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove Conv1D tf import (there isn't a TF conv1d op)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove numThreads from Nd4j

Signed-off-by: Ryan Nett <rnett@skymind.io>

* replace Old ops with their newer versions, deprecate ones that haven't already been deprecated

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove use of setNumThreads

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix for Reverse and ATan2

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fix test for wrong equals type

Signed-off-by: Ryan Nett <rnett@skymind.io>

* well it works now

Signed-off-by: Ryan Nett <rnett@skymind.io>

* better javadocs

Signed-off-by: Ryan Nett <rnett@skymind.io>

* NonNulls

Signed-off-by: Ryan Nett <rnett@skymind.io>

* better array literal

Signed-off-by: Ryan Nett <rnett@skymind.io>

* re-add tf import stuff (will remove later)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* conv1d config load fix

Signed-off-by: Ryan Nett <rnett@skymind.io>

* partial config usage changes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* remove Old op classes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* config property fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* removed one too many ops

Signed-off-by: Ryan Nett <rnett@skymind.io>
 2019-08-21 16:40:32 -07:00
raver119 d9ab299759
[WIP] Minor fixes (#140) 
* - Tile java shape fn removed
- Tile 0 validation added
- scatter_upd test

Signed-off-by: raver119 <raver119@gmail.com>

* additional tile validation

Signed-off-by: raver119 <raver119@gmail.com>

* - provide vector case in cuda scatter op

Signed-off-by: Yurii <yurii@skymind.io>

* cpu ismax view fix

Signed-off-by: raver119 <raver119@gmail.com>

* exp

Signed-off-by: raver119 <raver119@gmail.com>

* cuda ismax fix

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-21 15:05:47 +03:00
Alex Black a5867bb527
Upgrade Jersey to 2.29 (#139) 
Signed-off-by: AlexDBlack <blacka101@gmail.com>
 2019-08-21 18:34:49 +10:00
raver119 77805cb7fa
[WIP] cpu ismax fix (#137) 
* cpu ismax fix

Signed-off-by: raver119 <raver119@gmail.com>

* bunch of smaller scalar tests

Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-21 10:12:11 +03:00
raver119 4211f3b4ce one more scalar constructor fix 
Signed-off-by: raver119 <raver119@gmail.com>
 2019-08-21 08:53:36 +03:00