cavis/libnd4j/include/array/impl/DataBuffer.cpp

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String changes (#3) * initial commit * additional data types & tensor type Signed-off-by: raver119 <raver119@gmail.com> * next step Signed-off-by: raver119 <raver119@gmail.com> * missing include * sparse_to_dense Signed-off-by: raver119 <raver119@gmail.com> * few more tests files Signed-off-by: raver119 <raver119@gmail.com> * draft Signed-off-by: raver119 <raver119@gmail.com> * numeric sparse_to_dense Signed-off-by: raver119 <raver119@gmail.com> * comment Signed-off-by: raver119 <raver119@gmail.com> * string sparse_to_dense version Signed-off-by: raver119 <raver119@gmail.com> * CUDA DataBuffer expand Signed-off-by: raver119 <raver119@gmail.com> * few tweaks for CUDA build Signed-off-by: raver119 <raver119@gmail.com> * shape fn for string_split Signed-off-by: raver119 <raver119@gmail.com> * one more comment Signed-off-by: raver119 <raver119@gmail.com> * string_split indices Signed-off-by: raver119 <raver119@gmail.com> * next step Signed-off-by: raver119 <raver119@gmail.com> * test passes Signed-off-by: raver119 <raver119@gmail.com> * few rearrangements for databuffer implementations Signed-off-by: raver119 <raver119@gmail.com> * DataBuffer: move inline methods to common implementations Signed-off-by: raver119 <raver119@gmail.com> * add native DataBuffer to Nd4j presets Signed-off-by: raver119 <raver119@gmail.com> * DataBuffer creation Signed-off-by: raver119 <raver119@gmail.com> * use DataBuffer for allocation Signed-off-by: raver119 <raver119@gmail.com> * cpu databuffer as deallocatable Signed-off-by: raver119 <raver119@gmail.com> * DataBuffer setters for bufers Signed-off-by: raver119 <raver119@gmail.com> * couple of wrappers Signed-off-by: raver119 <raver119@gmail.com> * DataBuffers being passed around Signed-off-by: raver119 <raver119@gmail.com> * Bunch of ByteBuffer-related signatures gone Signed-off-by: raver119 <raver119@gmail.com> * - few more Nd4j signatures removed - minor fix for bfloat16 Signed-off-by: raver119 <raver119@gmail.com> * nullptr pointer is still a pointer, but 0 as address :) Signed-off-by: raver119 <raver119@gmail.com> * one special test Signed-off-by: raver119 <raver119@gmail.com> * empty string array init Signed-off-by: raver119 <raver119@gmail.com> * one more test in cpp Signed-off-by: raver119 <raver119@gmail.com> * memcpy instead of databuffer swap Signed-off-by: raver119 <raver119@gmail.com> * special InteropDataBuffer for front-end languages Signed-off-by: raver119 <raver119@gmail.com> * few tweaks for java Signed-off-by: raver119 <raver119@gmail.com> * pointer/indexer actualization Signed-off-by: raver119 <raver119@gmail.com> * CustomOp returns list for inputArumgents and outputArguments instead of array Signed-off-by: raver119 <raver119@gmail.com> * redundant call Signed-off-by: raver119 <raver119@gmail.com> * print_variable op Signed-off-by: raver119 <raver119@gmail.com> * - view handling (but wrong one) - print_variable java wrapper Signed-off-by: raver119 <raver119@gmail.com> * one more test Signed-off-by: raver119 <raver119@gmail.com> * - empty arrays handling Signed-off-by: raver119 <raver119@gmail.com> * - deserialization works now Signed-off-by: raver119 <raver119@gmail.com> * minor fix Signed-off-by: raver119 <raver119@gmail.com> * meh Signed-off-by: raver119 <raver119@gmail.com> * one more fix Signed-off-by: raver119 <raver119@gmail.com> * initial cuda commit Signed-off-by: raver119 <raver119@gmail.com> * print_variable message validation Signed-off-by: raver119 <raver119@gmail.com> * CUDA views Signed-off-by: raver119 <raver119@gmail.com> * CUDA special buffer size Signed-off-by: raver119 <raver119@gmail.com> * minor update to match master changes Signed-off-by: raver119 <raver119@gmail.com> * - consider arrays always actual on device for CUDA - additional PrintVariable constructor - CudaUtf8Buffer now allocates host buffer by default Signed-off-by: raver119 <raver119@gmail.com> * meh Signed-off-by: raver119 <raver119@gmail.com> * - print_variable now allows print from device Signed-off-by: raver119 <raver119@gmail.com> * InteropDataBuffer data type fix Signed-off-by: raver119 <raver119@gmail.com> * ... Signed-off-by: raver119 <raver119@gmail.com> * disable some debug messages Signed-off-by: raver119 <raver119@gmail.com> * master pulled in Signed-off-by: raver119 <raver119@gmail.com> * couple of new methods for DataBuffer interop Signed-off-by: raver119 <raver119@gmail.com> * java side Signed-off-by: raver119 <raver119@gmail.com> * offsetted constructor Signed-off-by: raver119 <raver119@gmail.com> * new CUDA deallocator Signed-off-by: raver119 <raver119@gmail.com> * CUDA backend torn apart Signed-off-by: raver119 <raver119@gmail.com> * CUDA backend torn apart 2 Signed-off-by: raver119 <raver119@gmail.com> * CUDA backend torn apart 3 Signed-off-by: raver119 <raver119@gmail.com> * - few new tests - few new methods for DataBuffer management Signed-off-by: raver119 <raver119@gmail.com> * few more tests + few more tweaks Signed-off-by: raver119 <raver119@gmail.com> * two failing tests Signed-off-by: raver119 <raver119@gmail.com> * one more test Signed-off-by: raver119 <raver119@gmail.com> * two failing tests pass Signed-off-by: raver119 <raver119@gmail.com> * now we pass DataBuffer to legacy ops too Signed-off-by: raver119 <raver119@gmail.com> * Native DataBuffer for legacy ops, Java side Signed-off-by: raver119 <raver119@gmail.com> * CPU java side update Signed-off-by: raver119 <raver119@gmail.com> * CUDA java side update Signed-off-by: raver119 <raver119@gmail.com> * no more prepare/register action on java side Signed-off-by: raver119 <raver119@gmail.com> * NDArray::prepare/register use now accepts vectors Signed-off-by: raver119 <raver119@gmail.com> * InteropDataBuffer now has few more convenience methods Signed-off-by: raver119 <raver119@gmail.com> * java bindings update Signed-off-by: raver119 <raver119@gmail.com> * tick device in NativeOps Signed-off-by: raver119 <raver119@gmail.com> * Corrected usage of OpaqueBuffer for tests. * Corrected usage of OpaqueBuffer for java tests. * NativeOpsTests fixes. * print_variable now returns scalar Signed-off-by: raver119 <raver119@gmail.com> * one more test Signed-off-by: raver119 <raver119@gmail.com> * compat_string_split fix for CUDA Signed-off-by: raver119 <raver119@gmail.com> * - CUDA execScalar fix - CUDA lazyAllocateHostPointer now checks java indexer/pointer instead of native pointer Signed-off-by: raver119 <raver119@gmail.com> * legacy ops DataBuffer migration prototype Signed-off-by: raver119 <raver119@gmail.com> * ignore device shapeinfo coming from java Signed-off-by: raver119 <raver119@gmail.com> * minor fix Signed-off-by: raver119 <raver119@gmail.com> * minor transformAny fix Signed-off-by: raver119 <raver119@gmail.com> * minor tweak for lazy host allocation Signed-off-by: raver119 <raver119@gmail.com> * - DataBuffer::memcpy method - bitcast now uses memcpy Signed-off-by: raver119 <raver119@gmail.com> * - IndexReduce CUDA dimension buffer fix Signed-off-by: raver119 <raver119@gmail.com> * views for CPU and CUDA Signed-off-by: raver119 <raver119@gmail.com> * less spam Signed-off-by: raver119 <raver119@gmail.com> * optional memory init Signed-off-by: raver119 <raver119@gmail.com> * async memset Signed-off-by: raver119 <raver119@gmail.com> * - SummaryStats CUDA fix - DataBuffer.sameUnderlyingData() impl - execBroadcast fix Signed-off-by: raver119 <raver119@gmail.com> * - reduce3All fix switch to CUDA 10 temporarily Signed-off-by: raver119 <raver119@gmail.com> * CUDA version Signed-off-by: raver119 <raver119@gmail.com> * proper memory deallocator registration Signed-off-by: raver119 <raver119@gmail.com> * HOST_ONLY workspace allocation Signed-off-by: raver119 <raver119@gmail.com> * temp commit Signed-off-by: raver119 <raver119@gmail.com> * few conflicts resolved Signed-off-by: raver119 <raver119@gmail.com> * few minor fixes Signed-off-by: raver119 <raver119@gmail.com> * one more minor fix Signed-off-by: raver119 <raver119@gmail.com> * NDArray permute should operate on JVM primitives Signed-off-by: raver119 <raver119@gmail.com> * - create InteropDataBuffer for shapes as well - update pointers after view creation in Java Signed-off-by: raver119 <raver119@gmail.com> * - addressPointer temporary moved to C++ Signed-off-by: raver119 <raver119@gmail.com> * CUDA: don't account offset twice Signed-off-by: raver119 <raver119@gmail.com> * CUDA: DataBuffer pointer constructor updated Signed-off-by: raver119 <raver119@gmail.com> * CUDA NDArray.unsafeDuplication() simplified Signed-off-by: raver119 <raver119@gmail.com> * CUDA minor workspace-related fixes Signed-off-by: raver119 <raver119@gmail.com> * CPU DataBuffer.reallocate() Signed-off-by: raver119 <raver119@gmail.com> * print_affinity op Signed-off-by: raver119 <raver119@gmail.com> * print_affinity java side Signed-off-by: raver119 <raver119@gmail.com> * CUDA more tweaks for data locality Signed-off-by: raver119 <raver119@gmail.com> * - compat_string_split tweak - CudaUtf8Buffer update Signed-off-by: raver119 <raver119@gmail.com> * INDArray.close() mechanic restored Signed-off-by: raver119 <raver119@gmail.com> * one more test fixed Signed-off-by: raver119 <raver119@gmail.com> * - CUDA DataBuffer.reallocate() updated - cudaMemcpy (synchronous) restored Signed-off-by: raver119 <raver119@gmail.com> * one last fix Signed-off-by: raver119 <raver119@gmail.com> * bad import removed Signed-off-by: raver119 <raver119@gmail.com> * another small fix Signed-off-by: raver119 <raver119@gmail.com> * one special test Signed-off-by: raver119 <raver119@gmail.com> * fix bad databuffer size Signed-off-by: raver119 <raver119@gmail.com> * release primaryBuffer on replace Signed-off-by: raver119 <raver119@gmail.com> * higher timeout Signed-off-by: raver119 <raver119@gmail.com> * disable timeouts Signed-off-by: raver119 <raver119@gmail.com> * dbCreateView now validates offset and length of a view Signed-off-by: raver119 <raver119@gmail.com> * additional validation for dbExpand Signed-off-by: raver119 <raver119@gmail.com> * restore timeout back again Signed-off-by: raver119 <raver119@gmail.com> * smaller distribution for rng test to prevent timeouts Signed-off-by: raver119 <raver119@gmail.com> * CUDA DataBuffer::memcpy now copies to device all the time Signed-off-by: raver119 <raver119@gmail.com> * OpaqueDataBuffer now contains all required methods for interop Signed-off-by: raver119 <raver119@gmail.com> * some javadoc Signed-off-by: raver119 <raver119@gmail.com> * GC on failed allocations Signed-off-by: raver119 <raver119@gmail.com> * minoe memcpu tweak Signed-off-by: raver119 <raver119@gmail.com> * one more bitcast test Signed-off-by: raver119 <raver119@gmail.com> * - NDArray::deviceId() propagation - special multi-threaded test for data locality checks Signed-off-by: raver119 <raver119@gmail.com> * DataBuffer additional syncStream Signed-off-by: raver119 <raver119@gmail.com> * DataBuffer additional syncStream Signed-off-by: raver119 <raver119@gmail.com> * one ignored test Signed-off-by: raver119 <raver119@gmail.com> * skip host alloc for empty arrays Signed-off-by: raver119 <raver119@gmail.com> * ByteBuffer support is back Signed-off-by: raver119 <raver119@gmail.com> * DataBuffer::memcpy minor fix Signed-off-by: raver119 <raver119@gmail.com> * few minor prelu/bp tweaks Signed-off-by: raver119 <raver119@gmail.com> * nullify-related fixes Signed-off-by: raver119 <raver119@gmail.com> * PReLU fixes (#157) Signed-off-by: Alex Black <blacka101@gmail.com> * Build fixed * Fix tests * one more ByteBuffer signature restored Signed-off-by: raver119 <raver119@gmail.com> * nd4j-jdbc-hsql profiles fix Signed-off-by: raver119 <raver119@gmail.com> * nd4j-jdbc-hsql profiles fix Signed-off-by: raver119 <raver119@gmail.com> * PReLU weight init fix Signed-off-by: Alex Black <blacka101@gmail.com> * Small PReLU fix Signed-off-by: Alex Black <blacka101@gmail.com> * - INDArray.migrate() reactivated - DataBuffer::setDeviceId(...) added - InteropDataBuffer Z syncToDevice added for views Signed-off-by: raver119 <raver119@gmail.com> * missed file Signed-off-by: raver119 <raver119@gmail.com> * Small tweak Signed-off-by: Alex Black <blacka101@gmail.com> * cuda 10.2 Signed-off-by: raver119 <raver119@gmail.com> * minor fix Signed-off-by: raver119 <raver119@gmail.com> Co-authored-by: shugeo <sgazeos@gmail.com> Co-authored-by: Alex Black <blacka101@gmail.com> Co-authored-by: Alexander Stoyakin <alexander.stoyakin@gmail.com>
2020-01-04 11:27:50 +01:00
/*******************************************************************************
* Copyright (c) 2015-2018 Skymind, Inc.
*
* This program and the accompanying materials are made available under the
* terms of the Apache License, Version 2.0 which is available at
* https://www.apache.org/licenses/LICENSE-2.0.
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
* WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
* License for the specific language governing permissions and limitations
* under the License.
*
* SPDX-License-Identifier: Apache-2.0
******************************************************************************/
//
// @author raver119@gmail.com
// @author Yurii Shyrma (iuriish@yahoo.com)
//
#include <array/DataBuffer.h>
#include <helpers/logger.h>
#include <array/DataTypeUtils.h>
#include <execution/AffinityManager.h>
namespace nd4j {
///// IMLEMENTATION OF COMMON METHODS /////
////////////////////////////////////////////////////////////////////////
// default constructor
DataBuffer::DataBuffer() {
_primaryBuffer = nullptr;
_specialBuffer = nullptr;
_lenInBytes = 0;
_dataType = INT8;
_workspace = nullptr;
_isOwnerPrimary = false;
_isOwnerSpecial = false;
_deviceId = nd4j::AffinityManager::currentDeviceId();
setCountersToZero();
}
////////////////////////////////////////////////////////////////////////
// copy constructor
DataBuffer::DataBuffer(const DataBuffer &other) {
throw std::runtime_error("DataBuffer copy constructor: we don't expect using of this constructor!");
_lenInBytes = other._lenInBytes;
_dataType = other._dataType;
_workspace = other._workspace;
_primaryBuffer = nullptr;
_specialBuffer = nullptr;
_deviceId.store(other._deviceId.load());
setCountersToZero();
allocateBuffers();
copyBufferFrom(other);
}
////////////////////////////////////////////////////////////////////////
DataBuffer::DataBuffer(void* primary, void* special,
const size_t lenInBytes, const DataType dataType,
const bool isOwnerPrimary, const bool isOwnerSpecial,
memory::Workspace* workspace) {
if (primary == nullptr && special == nullptr)
throw std::runtime_error("DataBuffer constructor: can't be initialized with both nullptr buffers !");
_primaryBuffer = primary;
_specialBuffer = special;
_lenInBytes = lenInBytes;
_dataType = dataType;
_workspace = workspace;
_isOwnerPrimary = isOwnerPrimary;
_isOwnerSpecial = isOwnerSpecial;
_deviceId = nd4j::AffinityManager::currentDeviceId();
setCountersToZero();
if(primary != nullptr)
readPrimary();
if(special != nullptr)
readSpecial();
}
////////////////////////////////////////////////////////////////////////
DataBuffer::DataBuffer(void* primary, const size_t lenInBytes, const DataType dataType, const bool isOwnerPrimary, memory::Workspace* workspace):
DataBuffer(primary, nullptr, lenInBytes, dataType, isOwnerPrimary, false, workspace) {
syncToSpecial(true);
}
////////////////////////////////////////////////////////////////////////
// copies data from hostBuffer to own memory buffer
DataBuffer::DataBuffer(const void* hostBuffer, const DataType dataType, const size_t lenInBytes, memory::Workspace* workspace) {
if (hostBuffer == nullptr)
throw std::runtime_error("DataBuffer constructor: can't be initialized with nullptr host buffer !");
if (lenInBytes == 0)
throw std::runtime_error("DataBuffer constructor: can't be initialized with zero length !");
_primaryBuffer = nullptr;
_specialBuffer = nullptr;
_lenInBytes = lenInBytes;
_dataType = dataType;
_workspace = workspace;
_deviceId = nd4j::AffinityManager::currentDeviceId();
setCountersToZero();
allocateBuffers();
copyBufferFromHost(hostBuffer, lenInBytes);
}
////////////////////////////////////////////////////////////////////////
DataBuffer::DataBuffer(const size_t lenInBytes, const DataType dataType, memory::Workspace* workspace, const bool allocBoth) {
_dataType = dataType;
_workspace = workspace;
_lenInBytes = lenInBytes;
_primaryBuffer = nullptr;
_specialBuffer = nullptr;
_deviceId = nd4j::AffinityManager::currentDeviceId();
setCountersToZero();
if(lenInBytes != 0) {
allocateBuffers(allocBoth);
writeSpecial();
}
}
////////////////////////////////////////////////////////////////////////
// move constructor
DataBuffer::DataBuffer(DataBuffer&& other) {
_primaryBuffer = other._primaryBuffer;
_specialBuffer = other._specialBuffer;
_lenInBytes = other._lenInBytes;
_dataType = other._dataType;
_workspace = other._workspace;
_isOwnerPrimary = other._isOwnerPrimary;
_isOwnerSpecial = other._isOwnerSpecial;
_deviceId.store(other._deviceId);
copyCounters(other);
other._primaryBuffer = other._specialBuffer = nullptr;
other.setAllocFlags(false, false);
other._lenInBytes = 0;
}
////////////////////////////////////////////////////////////////////////
// assignment operator
DataBuffer& DataBuffer::operator=(const DataBuffer& other) {
if (this == &other)
return *this;
deleteBuffers();
_lenInBytes = other._lenInBytes;
_dataType = other._dataType;
_workspace = other._workspace;
allocateBuffers();
copyBufferFrom(other);
return *this;
}
////////////////////////////////////////////////////////////////////////
// move assignment operator
DataBuffer& DataBuffer::operator=(DataBuffer&& other) noexcept {
if (this == &other)
return *this;
deleteBuffers();
_primaryBuffer = other._primaryBuffer;
_specialBuffer = other._specialBuffer;
_lenInBytes = other._lenInBytes;
_dataType = other._dataType;
_workspace = other._workspace;
_isOwnerPrimary = other._isOwnerPrimary;
_isOwnerSpecial = other._isOwnerSpecial;
copyCounters(other);
other._primaryBuffer = other._specialBuffer = nullptr;
other.setAllocFlags(false, false);
other._lenInBytes = 0;
return *this;
}
////////////////////////////////////////////////////////////////////////
void* DataBuffer::primary() {
return _primaryBuffer;
}
////////////////////////////////////////////////////////////////////////
void* DataBuffer::special() {
return _specialBuffer;
}
////////////////////////////////////////////////////////////////////////
DataType DataBuffer::getDataType() {
return _dataType;
}
////////////////////////////////////////////////////////////////////////
size_t DataBuffer::getLenInBytes() const {
return _lenInBytes;
}
////////////////////////////////////////////////////////////////////////
void DataBuffer::allocatePrimary() {
if (_primaryBuffer == nullptr && getLenInBytes() > 0) {
ALLOCATE(_primaryBuffer, _workspace, getLenInBytes(), int8_t);
_isOwnerPrimary = true;
}
}
////////////////////////////////////////////////////////////////////////
void DataBuffer::setAllocFlags(const bool isOwnerPrimary, const bool isOwnerSpecial) {
_isOwnerPrimary = isOwnerPrimary;
_isOwnerSpecial = isOwnerSpecial;
}
////////////////////////////////////////////////////////////////////////
void DataBuffer::deletePrimary() {
if(_isOwnerPrimary && _primaryBuffer != nullptr && getLenInBytes() != 0) {
auto p = reinterpret_cast<int8_t*>(_primaryBuffer);
RELEASE(p, _workspace);
_primaryBuffer = nullptr;
_isOwnerPrimary = false;
}
}
////////////////////////////////////////////////////////////////////////
void DataBuffer::deleteBuffers() {
deletePrimary();
deleteSpecial();
_lenInBytes = 0;
}
////////////////////////////////////////////////////////////////////////
DataBuffer::~DataBuffer() {
deleteBuffers();
}
void DataBuffer::setPrimaryBuffer(void *buffer, size_t length) {
if (_primaryBuffer != nullptr && _isOwnerPrimary) {
deletePrimary();
}
_primaryBuffer = buffer;
_isOwnerPrimary = false;
_lenInBytes = length * DataTypeUtils::sizeOf(_dataType);
}
void DataBuffer::setSpecialBuffer(void *buffer, size_t length) {
this->setSpecial(buffer, false);
_lenInBytes = length * DataTypeUtils::sizeOf(_dataType);
}
void DataBuffer::setDataType(DataType dataType) {
_dataType = dataType;
}
int DataBuffer::deviceId() const {
return _deviceId.load();
}
void DataBuffer::close() {
this->deleteBuffers();
}
void DataBuffer::setDeviceId(int deviceId) {
_deviceId = deviceId;
}
}